Cryptococcus decagattii: 89988964
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Entry
89988964 CDS
T10966
Symbol
IAS62_002190
Name
(RefSeq) uncharacterized protein
KO
K12879
THO complex subunit 2
Organism
cdec Cryptococcus decagattii
Pathway
cdec03013
Nucleocytoplasmic transport
cdec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
89988964 (IAS62_002190)
09122 Translation
03013 Nucleocytoplasmic transport
89988964 (IAS62_002190)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdec03019
]
89988964 (IAS62_002190)
03041 Spliceosome [BR:
cdec03041
]
89988964 (IAS62_002190)
Messenger RNA biogenesis [BR:
cdec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
89988964 (IAS62_002190)
Spliceosome [BR:
cdec03041
]
Complex C
Other components
EJC/TREX
89988964 (IAS62_002190)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
89988964 (IAS62_002190)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THOC2_N
Tho2
Thoc2
Motif
Other DBs
NCBI-GeneID:
89988964
NCBI-ProteinID:
XP_064720129
UniProt:
A0ABZ2AQU7
LinkDB
All DBs
Position
3:join(1580639..1581103,1581152..1581724,1581779..1581874,1581919..1583155,1583203..1583669,1583726..1584515,1584565..1584696,1584778..1585022,1585074..1585261,1585312..1585375,1585429..1587127,1587183..1587325)
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AA seq
2032 aa
AA seq
DB search
MPPRRSTAKSKVQSVTASSHSLSELITPTLNEQLLDFILKWETTGTESLHGLIISLLNTI
ALAPTTLGVVPLLHVLVTLLKSNVDERELTGVFEGVLDELEDERRDIFGEALVDAVEVLE
EEQEDMGENKNKEEKETENSEDKSLKGLSILKLLLESNTLPSYIPNLLLNPERLIPLNLH
PIPRNPRALQSALVKKNTTLFFKQRKFNLLRECSEGFSGLIVLLASDDTLPSHPEEENDE
ERRKRAERVWGKIMRLIGYFNLSPPRVLDIILEVFSCHITHHWSFFLELLRCSPWRPSSN
QEDGDGESSTEKGWKEEEVEGIKNALKRDGDRVLSQVLGFKFGFFRKPEAGDTPICLIFT
AAVLIKHGFVSLTDLLPCLSPDDNEMETVRKKWASSLSSRSGPANALTNTILDDDEPPSG
ATATTEQAQNIPAKPPPEQRVQLTQALLALGDKASSEYMLARWPWIAQKNIGVADLILDI
VEDAIKPIYEQVAAKRKEEEEFDLQAVSPVVQELESIEKQTVLTLFAPTPPETTTKRFKF
FYPHREGVSESWSSVEEIHEKGLRWLGLIGGLGGRRARLMIMLSRIGAAQFERLRKDKAE
QGLAAEHLQPTMEELKPWLDIIRVSLLPSLSCSSASGTFDVELWSLLKLFPYISRYSLYG
EWRDSTCNANGKNPCLIATHAAAMTTKEVQKALRRVTSTNTSATSGATPTERHSARALAK
QSHHNPVFVWTTAVTQVKAYPNIGEAIVDAGRYMAQLSFDVATFVMLDTLSDNRALRLNE
MGTGVALWLERLSKFVGDFNRRYSNMDLYPVLQYIINRLMRGHSGDLIILEKLMSSMSGI
EPVPNDGVSEAQLQAYAGGREMIREAFSATRISVTAPPEPGASEQPVRAPIEKVKNVKKS
LPRLVNALREKELAMPIWIALAQTRQAVVDKMVNAPIKAMNLVQDTCHNAFVQFGDFLVD
YLTSDEHIALTPDLQQLIVDFGLEYGMAFQILRPRLNAEIERARVEEKAAVQARLEAAKK
AMSEKEKTGSPQKIESPALPGSPMTPSLQITPGATPGPGEIEDVVMEESEKEALSVPATK
TPSAKGKMWWPSALTPTMQQTRKLLPREANEVMSAPFFVIFWHLTTPDIAFSPQSYDNAI
KSINRHISTISSWRVNPRDKTKVAEQRDELTRLKARVKVLQEEKETHGSLVNGPMKRRMR
LESGKWFGKAIVEKNLQRPLAIQLHQYCFYPRAVLSPCDAVFVARFIRMAHDLDSEARNL
GRCLALILADLDKWHQSENVYLKEALGISPNPTEGGEQNRLPGMLFRSKAGDDMREMSWQ
EFRNFYAKCHNVLTRALISCWSEAEFMHNKNAIIVALQVIKYFPLMETNGKAIETAVKKL
QAGEVGEIPNDLKMMCTSFLSGLKKRQNARPFVAPATFHGAAARAAVARAPSAPKFESPA
PSATISTPSRLQPANGANDTASPSPAGTPRAITADPRTLRQKVEESRARAAASAAAKEQE
AGTAPRSPLVHPIPTRPCLPSRLASSANSVPVTPTGPSAVTRTSTSNATSVNSGAHTPAS
SMGPPPDISVDEARAAARARRLGGIHRPPPSLPFVVAQTAQNAASTSPTNLDVEKQEENV
EVKEKEPGTPPTPFVESTRGKSPPASLKVSPTTTVRTHREGSVESRASERSKRREQDRDR
YRRDRDHRDREKERDRRDRSTAEDDKKRQEDSVPASIQSDAGRESRRARRDGERERDKEE
KKSRERDKEDRKERGRDRSYRGEDSDRKRKRDEEPSSRKLEPDASNGGRKERERERRRYD
ERDRERERDSRDRERDRERDRNERDRDGHRDRRERERDGRRRDRDSRDVRDIRERHRTPP
AEDRPDLAPAASKDSTDTTPNAFGPGVARTPHALPARPGNAEQVPKPPPSAAPVSQTPQE
PLNLAARMGIMTRSASPHVRANEPIHRSTRDDLGRDNDWSNAPRREEARMEEARKEPIDR
KRALEAEAGSEAREESPGASKRVKIDRDKARGRRQEGGAKMFQQAMGGTKDK
NT seq
6099 nt
NT seq
+upstream
nt +downstream
nt
atgcctccccgtcgaagtacggccaagtcaaaggttcaatccgtaacagcctcttctcac
tctctctccgaactcatcacacccacactcaatgagcagctgttggacttcattttgaaa
tgggaaacaacgggtaccgagtctcttcacggacttataatatcgctcctcaatactatt
gctttggcgcctacgacacttggcgttgtgccattactacacgtgcttgtgacgcttctc
aaatccaatgtggatgaaagggagctcactggtgtgttcgaaggcgttttagatgagctc
gaagacgaaagaagggatatcttcggtgaagcactggtggatgctgtagaagtgttggaa
gaggagcaagaggacatgggcgaaaacaaaaacaaagaagagaaggagactgagaactca
gaagacaagtctctaaaaggactttcaatcctcaaacttctccttgagtcaaatactctt
ccttcatatatccccaatctcctcctgaacccagaacgtctcatccctctcaatcttcac
cctattccccgaaaccctcgggctttgcagagtgctttggtcaagaaaaacacgactctt
tttttcaagcaacgaaaattcaatctcttacgtgaatgttccgaaggtttctccggattg
atcgtgcttctagcttcagacgacactcttccatctcatccagaggaagagaatgatgaa
gaacgaagaaagagggcagaaagggtctggggaaagatcatgcgactgataggatacttc
aacctctcaccgccaagggtgctggatatcatcctcgaagtgttcagctgccacattaca
catcactggtccttcttccttgagctcttgaggtgctcgccatggaggccaagctctaac
caggaggatggtgatggcgaaagctccacagaaaagggctggaaggaagaagaggttgaa
ggaatcaagaatgctttgaagcgggacggggacagagttctgagtcaagttttggggttt
aagtttgggttctttcgaaaacctgaggctggcgacacacctatctgtctcattttcact
gctgctgtccttattaagcacggctttgtcagcttgacggaccttttgccatgtctttct
cctgatgacaacgagatggaaacagtacgcaagaaatgggcgtcatctctttcatcacga
tctggccccgctaatgctctgaccaataccattctggacgatgatgaaccaccctctggc
gccactgcgactacggaacaagcccaaaatatcccggcaaagccgcctccagagcaaagg
gtacagcttactcaagcacttctcgcattgggcgacaaggcttcatcagagtatatgttg
gcaaggtggccatggatcgcgcagaagaatataggagtagcagatctaatcttggacatc
gtggaagatgccataaaaccaatctacgaacaagttgcggccaagcgaaaggaggaagaa
gagtttgacctgcaggctgtctctcctgtagtgcaagagttagaatcaatcgagaaacag
accgtcttgactctgtttgcccctacaccccccgaaacgacgaccaagagattcaaattc
ttctatccccatcgtgagggcgtttcggaaagctggtcgtctgtagaagagattcacgag
aagggcttgagatggctgggtttgattggcggacttggaggaagaagagcgaggcttatg
atcatgcttagcagaatcggagctgcgcagtttgaacggctccgaaaggataaggcggag
cagggactggcagcagagcatttgcagccgacgatggaggagctcaagccctggcttgac
atcatccgagtctcccttcttccttctctgtcctgttcttctgcctcagggacgttcgat
gtcgaactctggtcccttcttaaactcttcccctacatctcacgatactctctctatggc
gaatggcgagatagcacttgcaatgcaaatggcaagaatccttgtctaatagcaactcac
gccgcggcgatgactaccaaagaagttcaaaaggcccttcgacgagtcacttcaaccaac
acctctgctacatccggtgcgactcctaccgaacgacatagtgctcgagcgctcgccaaa
caaagtcaccataaccctgtgtttgtctggacaactgcagtgacacaagtgaaagcgtac
ccgaacatcggagaggctatcgtagatgcaggaaggtatatggctcaactgtcgtttgac
gtggccacgtttgtcatgttagatactttgtcggacaacagggctttgaggctgaatgag
atgggtaccggtgtggcactctggttggaacgattgtccaaatttgttggagatttcaac
agacgatacagcaacatggatctttatcctgttttgcaatacatcatcaatcgacttatg
cgtggccactctggtgatctcatcatccttgaaaaactaatgtcttccatgtcaggcatt
gaaccagtccctaacgatggtgtttctgaggcccagcttcaagcatatgctggaggccgc
gaaatgatacgcgaggccttctcagccactcgaattagcgtaactgcccctccagaacct
ggcgcatcggagcaacccgtgcgagcgcctatagagaaagtgaaaaacgtgaagaagagt
ttgccgaggttggtcaatgcattgagggaaaaggagttggcaatgcctatctggatagct
ttagcgcagacaaggcaggcggtagtggacaagatggtaaatgcacctatcaaggccatg
aaccttgtccaggatacttgccacaacgcatttgtccagttcggcgatttcctcgttgac
taccttacttctgacgagcatatcgctcttactcccgatcttcagcaacttatagttgat
tttgggctcgagtatggcatggccttccagatcttgcgaccacgtctaaatgctgagatt
gaacgtgcacgtgtcgaggagaaagccgccgtgcaggcgcggcttgaagccgcgaagaag
gcaatgtccgagaaggagaagaccggatcgcctcaaaaaattgagagccccgcgcttccc
ggatcgcccatgacgccgtctttgcagatcactccaggtgctactccgggaccaggcgaa
attgaggatgtcgtaatggaggagagtgaaaaggaggcacttagtgtacctgcaactaaa
acgccgagcgctaaaggcaagatgtggtggccctctgctttgacgcctaccatgcaacaa
acacgaaaacttttaccacgtgaagctaatgaggtcatgagtgcgcctttctttgtcatt
ttctggcatcttacgacccccgacattgctttctcccctcaatcgtacgataacgccata
aagtctatcaatcgacatatctccaccatctcctcttggagggtaaacccaagggataaa
acaaaggtggcggagcagcgggatgagttgactagactgaaagcgagggtgaaggttctg
caagaggaaaaagaaacacacgggtcgctggttaacggaccaatgaagaggaggatgagg
ctggagagtggcaagtggtttggcaaggccattgtggagaagaaccttcaaaggccgtta
gctattcagcttcatcaatattgtttctaccctcgagctgttctttcgccctgcgacgcc
gtcttcgtcgccaggtttatccgtatggctcatgacttagatagtgaagctcgtaatctt
ggtcgatgcctggctttgattcttgccgatttggataagtggcatcagagcgaaaacgtg
tacctcaaggaggcgctcggcatctcacctaatcccactgagggtggggaacaaaatagg
ctacctggtatgctctttaggtcaaaggccggtgatgatatgcgtgaaatgtcgtggcaa
gaattcagaaacttctacgccaagtgtcataacgtcctcacgagggctctcatttcatgt
tggagcgaagcagaattcatgcataacaagaatgcgatcattgtcgccttgcaagtaatc
aaatacttcccactcatggagacaaatggcaaagcaatcgagacagcagtgaagaagctg
caagccggtgaggttggcgagatccctaatgatttgaagatgatgtgcacttccttctta
tcgggtctgaagaaacgtcagaacgccagaccattcgttgctcctgcaacattccacggc
gccgccgctcgagctgctgttgcaagggcaccaagcgcccctaagttcgaatctccagct
cccagcgccaccatatcaactccctctcggctccaaccagctaacggtgcaaatgataca
gcatcgccttctccagccggtactccgagagccatcactgccgaccccagaactttgcgt
caaaaggttgaagaaagtcgagccagggcggcggcttcggcagccgctaaggaacaggaa
gctggcactgctccgcggtctcctcttgtacaccccatccccactcgaccctgtctgcct
tctcgtcttgctagttctgctaactcagtccctgtgactccaactgggccctcggccgtt
actcgaacttctacgtctaatgcaacctctgtgaactcaggtgctcacacgcctgcctct
tctatgggtccacctcccgatatatctgtggatgaagcccgagctgctgcacgtgcccgc
agactcggaggtattcatcgcccccctccatctctaccgtttgttgtagcacagactgca
cagaatgcggcatctacgtcccccacgaacttggatgttgagaaacaggaggaaaacgtg
gaagtgaaagagaaagagcctggtactccacctactccctttgtggaatctactcgtggc
aaatctcctccagcctcccttaaggtatcgcctacaactactgtgaggactcacagggag
ggcagcgtcgaaagccgggcgagcgagaggtcgaagaggcgcgagcaagacagagatagg
taccgtcgtgacagagatcacagggatagggaaaaggagagggatcgacgggatcgatct
actgcagaagatgacaagaaacgccaggaagatagcgttccagcgtccattcaaagtgat
gcagggcgcgaatcgaggagggccaggcgtgatggagagcgagaaagagacaaggaggag
aagaagagtcgagagcgagacaaggaggacagaaaggaaagaggcagggataggtcttac
cgaggcgaagacagtgatcgcaagcgcaagagggatgaggagccttcgtcgaggaaactc
gagccagacgcgtcaaatggcggtaggaaagagcgtgaacgcgagcgaagaagatacgat
gaacgggatagggaaagggaacgcgattccagagatcgggagagggaccgagaaagggat
agaaacgagcgagacagggatggccatcgtgatagacgcgaacgtgagcgggatggtcgg
cgacgagaccgagacagccgcgatgtccgagacatccgtgagcgacatcgcacacctcct
gctgaagaccgtcccgatcttgcacccgctgcctccaaagacagtactgatactacgccc
aacgctttcggcccgggggttgcgagaacaccccatgcccttccggcaagacctggcaat
gctgagcaggttcccaaaccacctccgagcgctgctccagtatcccaaactccccaagaa
cctctcaatctggctgctagaatgggcatcatgacacggtcggcttctcctcatgtaagg
gctaatgagcctatccatagatctacgagagatgacctagggagggataatgactggagt
aatgcgccgaggagagaagaagccagaatggaggaagcgaggaaagagcctattgatcgg
aaacgagctttagaagctgaggctggctccgaggctcgagaggagtcccctggagcatcc
aaacgtgtcaagattgatcgtgacaaggcccgtggacgaaggcaagagggcggcgcgaaa
atgttccaacaagctatggggggtacaaaggacaaatag
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integrated database retrieval system
