Cryptococcus decagattii: 89988972
Help
Entry
89988972 CDS
T10966
Symbol
IAS62_002198
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
cdec Cryptococcus decagattii
Brite
KEGG Orthology (KO) [BR:
cdec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdec03021
]
89988972 (IAS62_002198)
03036 Chromosome and associated proteins [BR:
cdec03036
]
89988972 (IAS62_002198)
Transcription machinery [BR:
cdec03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
89988972 (IAS62_002198)
Chromosome and associated proteins [BR:
cdec03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
89988972 (IAS62_002198)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
SPT6_acidic
Spt6_S1
HHH_9
CTD
SH2
Tex_YqgF
HHH_3
Motif
Other DBs
NCBI-GeneID:
89988972
NCBI-ProteinID:
XP_064720137
LinkDB
All DBs
Position
3:join(1601957..1602549,1602601..1602724,1602773..1604944,1604994..1606173,1606226..1606365,1606422..1606730)
Genome browser
AA seq
1505 aa
AA seq
DB search
MSDRSGSASEGEGDEIRPYGEDRDSSEESEDDDPEEAKRIAEGFIVDEDEEDAEGEDDEE
DEEARRRRRKEEKRRRKKERRMRRGREEVELSEDELELIEENRGLREGRPLKRLRRRSGS
EGSENDRAVPTLQDMFRDDEDRMEDDDDDLMDFIEEDEEDEANQGETEEQRRERRRAEKL
KRREQARSRPELTGVDRSSWDEIFAVFGDGQDYDWALEGEDGIDLDEEEAAKKDLRLEDV
FDPAEIKARRLQDEDKAVANADRPERHQLVNSTLSNNPVFATDTLYPPPDFAAKWVAPKV
SFRTQYLFCNQHPEGSYPIPTVDNPQPYPVYRRPDLEMEFEKAVSTALNMMFVQHLEVPY
LWHYKRDVFSLLENQGQSSVLFLERDELWQVYVLGQRYRAIHERNEQTRQQWEKIKARKG
DIEDEYFTKGLLGKACVTSIEAAGEGAEWLAYHYASDIKAIKEEEAFDEISKKLPEKAEH
EDIRRGKIMKLVEAFGIDANKVASSFQDVNGQPAPVMNPDKMPLELADEFTGAAYSSPEQ
ALSAASFVLIQELSKDPAIRQQARDFMDACGLVTVNATDRGMSVIDQYHLYYNFKFLTDK
PVLAFRDSPQFIHMLKAEEEGLISIAFDIPENMLATFTDALIRCCRSNDYGEIASAWNEV
RVEACNTLVKKHLMPMASKWIKEHLRTQAEEYIAERCREELELRVNVRPYASSGMEQGET
PSVLAITNGKGDIRDAVMAVMLDDEGNVRTQTKFDNLRDEEDKTIFIELLEKRKPKVIVI
GGFSVQTARLKDAALAAIRQHAIDRLGQNPPVSDAYPNHEGFQYAMAEYDEKLKAHLIPL
IFVNDSTAKLYMSSEEAEKEHPNLPLNGRYALGLARYAQNPLNAYCKLGRHIASVTFMEH
HQKLIPQEKLLYHLERGLVNSVCFMGIEINSCVADPYQRAMFPYIAGLGPRKADAVIYGI
QKHGALINRMAFTDLGLFGPTIFENTAGFLTIESDLKDMMLEAENPQEQPDPLDMTRIHP
ENYEFAQKMCQDALDLDVEDVADRHKSEVVQTLMLDDKRGKKLGELNLDDFAFNLQRQGE
GNKRHTLGEIVSELIRYRSDRRPPFYVPTDWEIVTMVTGETERTVGRGLKVTATVRKALS
ARVFCQLESGLDAVLERDYVADEDQAPVTSCDEVFKPRQAIKGVVIMPEPARFQVRISTR
PSDLRQGVDFVQPFKDEEYNNKDRRDAAEAATAAKKQRRAGKVQRIVNHPNWHVLNSGQA
EQFLASQHRGDCVIRPSSKGPDRIAVTWKVDEDVYQHIDVQEIDKPNEYSLGRILMVGGQ
YRYSDLDDLIINHVKATARKFDEIQMHEKYKPEHELDAFLKNYVQAHPGRSIYGFSVDSD
RPGYLKLCFLSKPTKDGGVIQTWPVRVLPGAYKLGNAIVPGVTELSNAFKMQYSEKLAEQ
GHQGKTPGIYLGKTPMHLGGRTPALGSRTPAMGSRTPALGSRTPAFGSKTPALGSRTPAQ
GGPRY
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacaggtctggctccgcctctgaaggcgaaggcgacgaaatccgaccatatggc
gaagaccgtgactcgtctgaagaatctgaagatgatgatcctgaagaggccaagcggatt
gcggagggattcatagtcgatgaggatgaggaagacgcagaaggagaagacgacgaggaa
gatgaagaggcaagacggagacgaaggaaggaagagaaacggcgtaggaagaaggaaagg
agaatgagaagagggcgagaagaagtagagctctcggaggatgagctggagctgattgaa
gaaaatcgtggactacgtgaagggagaccgttgaagagattgaggaggcgtagtgggtct
gaagggtcagagaatgacagggctgtgcctactttgcaagacatgtttcgagatgatgaa
gaccgaatggaagatgatgacgacgatctcatggactttattgaagaggacgaagaagat
gaggccaaccaaggagagacggaggagcagagaagagagagaaggagggcagagaagctg
aagagaagagaacaggctaggagccgtccagagctgactggagtggaccgatcttcgtgg
gatgagatttttgctgtatttggcgatggtcaagattacgattgggcactcgagggcgag
gatggtattgatttggacgaagaagaggcagctaagaaggacctccgtctagaagatgtg
ttcgaccctgccgaaatcaaagcaaggagattgcaggacgaagataaggctgtcgccaac
gctgatcgacctgagaggcaccaacttgtcaactctacattatccaacaatccggttttc
gcgaccgataccctttacccacccccggattttgccgcgaaatgggttgcgcctaaggtg
tccttccgtacccaatatctcttttgcaaccaacatcccgaaggatcctatcctattcct
acagttgacaaccctcagccttatcctgtgtaccgccggcctgatctcgagatggaattt
gaaaaggctgtgtcgaccgctctcaacatgatgtttgtgcaacacttagaggtaccctac
ctatggcactacaagcgcgacgtattcagtttgttggaaaaccaaggacaaagctctgtc
cttttcttggagcgagatgaactttggcaggtctatgttcttggacaacgctaccgagca
attcacgaaaggaacgagcaaaccaggcaacaatgggagaaaattaaagcgcgaaagggt
gatattgaggatgagtacttcaccaagggattgctcggtaaagcttgcgtgacgagcatt
gaagcagctggagaaggtgctgaatggcttgcatatcactatgcgtctgatatcaaggca
atcaaggaggaagaggcgtttgacgagatatcgaagaagttaccagagaaggcagagcac
gaagatattcggcgagggaagatcatgaaattggtggaggccttcggtattgacgccaat
aaagtcgcttcatctttccaggatgtcaatggtcagccggcacctgtaatgaatccggac
aagatgcctctcgagttggcggatgaatttacaggtgcagcatattcaagccctgagcaa
gctctctctgccgctagctttgtccttatccaagaactgtccaaggatccagctatccgt
cagcaagctcgggacttcatggatgcctgcggtctagttacagtgaatgccactgataga
ggcatgtcggtaatcgaccagtatcacctttactacaattttaagttcctgaccgacaaa
cctgttcttgcttttagggacagtcctcaattcattcacatgctcaaggccgaggaggag
ggtcttatcagtattgcattcgacatccctgaaaatatgctcgcaacattcactgatgct
ctcatccgatgttgccggtcgaatgactacggggagattgcttcggcctggaatgaagtc
agggtggaggcttgtaatacattagtgaagaagcacttgatgcccatggcctccaagtgg
attaaggaacatctcaggactcaggccgaggaatatattgctgaacgatgtcgagaagaa
ttagaactgcgtgtcaatgtccgaccttatgcctcatcgggcatggagcaaggtgaaact
ccctccgtccttgccatcaccaacggtaaaggtgatatccgagatgccgtcatggctgtc
atgctcgatgacgaaggtaacgtccgtacacaaactaaatttgacaacttgcgcgacgaa
gaggacaagacaatcttcatagaattgctggaaaagcgaaagcccaaggtcatagtcatt
ggcgggttttctgtccagactgcgcgtctcaaagacgctgctcttgctgctatccgccag
cacgccatagatcgtttaggtcaaaatccaccagtatccgatgcttatcctaatcacgag
ggattccagtatgctatggcggaatacgatgagaaacttaaggcgcatctaattcctctt
atctttgtcaacgactcgacggcgaagttgtatatgtcttcagaagaggctgagaaggaa
cacccaaacttgcccttgaatggacggtatgctttgggtctggcgaggtacgcgcagaac
cccttgaatgcgtattgcaaactgggtaggcatattgcctcagtgaccttcatggagcac
catcaaaagcttattcctcaagagaaacttctctaccatctcgaacgaggtctcgtgaac
tcagtctgcttcatgggtatagaaattaactcatgtgtggctgatccttatcagcgggca
atgtttccatacattgccggtctgggccccagaaaggcagatgctgttatatatggtatt
cagaagcatggcgcccttatcaatcgtatggcgttcactgacctcggtctctttggacct
accatcttcgaaaacactgctggtttccttacgatagaatctgatctcaaggacatgatg
ctggaagccgaaaaccctcaagagcagcccgaccctcttgatatgacccgaattcatccc
gaaaattacgagttcgcccaaaagatgtgtcaagatgcccttgatctcgacgttgaggat
gtggcagatcgacacaagtcagaagttgtccagactcttatgcttgatgataagcgaggg
aagaaactaggagagctcaacttagatgattttgctttcaatcttcaacgacaaggtgaa
ggtaataagcgtcacactcttggagagatcgttagcgaattgatcagataccgatctgat
cgtcgaccccctttctacgttcctactgactgggagattgtgactatggttacgggagaa
actgaaagaactgttgggagaggattgaaggtgaccgcaactgtcagaaaagccctttcc
gctcgagttttctgccagcttgaatcaggtttggacgctgttcttgagcgagattacgtc
gccgacgaggatcaagctccggtcacctcttgcgacgaagtattcaagcctcgtcaagct
atcaagggcgtcgttatcatgcctgagcctgctcgtttccaagtacgtatatccactcga
ccctctgatctccgacaaggtgtcgattttgtccaacctttcaaagatgaggaatacaac
aataaagatcgtcgagatgcagccgaggcagcgaccgccgcgaagaagcagcgtagagca
ggcaaggttcagcgtattgtcaaccaccccaactggcatgtccttaattctggtcaggcc
gagcagttccttgcaagccaacatcgaggtgattgtgtcatccgaccctcatctaagggt
cctgatcggattgcggtgacctggaaggttgatgaggatgtttatcaacacattgatgtg
caagagattgataagccaaatgaatactctctgggaaggatcctgatggtcggcggtcaa
tacaggtatagtgacctggatgacttgatcattaaccatgtcaaagcaaccgcgaggaag
ttcgatgagattcaaatgcacgagaagtacaagccggaacacgagcttgatgctttcttg
aagaactatgtgcaggcccatcctggaagaagtatctatggcttcagcgttgacagcgat
cgaccagggtatctcaagctttgcttcctcagcaagcctacaaaagacggtggggtcatt
caaacctggcccgttcgagtccttcctggtgcctataaacttggtaacgctatcgttcca
ggtgtcaccgagctcagcaatgccttcaaaatgcaatactctgaaaagcttgcagaacaa
ggccaccaaggcaaaaccccaggtatttacctcggtaaaacccccatgcatcttggcggg
cgaacgcctgccctggggtccaggacccccgcaatgggttctagaactcctgctctaggt
tccagaacgccggcctttggatcaaaaacaccagccctcgggtctagaacacccgcccag
ggaggaccgaggtattaa
DBGET
integrated database retrieval system
