Cryptococcus decagattii: 89988979
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Entry
89988979 CDS
T10966
Symbol
IAS62_002205
Name
(RefSeq) uncharacterized protein
KO
K10756
replication factor C subunit 3/5
Organism
cdec Cryptococcus decagattii
Pathway
cdec03030
DNA replication
cdec03410
Base excision repair
cdec03420
Nucleotide excision repair
cdec03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cdec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
89988979 (IAS62_002205)
03410 Base excision repair
89988979 (IAS62_002205)
03420 Nucleotide excision repair
89988979 (IAS62_002205)
03430 Mismatch repair
89988979 (IAS62_002205)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdec03032
]
89988979 (IAS62_002205)
03036 Chromosome and associated proteins [BR:
cdec03036
]
89988979 (IAS62_002205)
03400 DNA repair and recombination proteins [BR:
cdec03400
]
89988979 (IAS62_002205)
DNA replication proteins [BR:
cdec03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
89988979 (IAS62_002205)
DNA Replication Termination Factors
ELG1-RFC complex
89988979 (IAS62_002205)
Chromosome and associated proteins [BR:
cdec03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
89988979 (IAS62_002205)
DNA repair and recombination proteins [BR:
cdec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
89988979 (IAS62_002205)
Check point factors
HRAD17(Rad24)-RFC complex
89988979 (IAS62_002205)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA
Rad17
AAA_22
AAA_lid_RFC1
DUF3802
AAA_11
MTC2_N
AAA_assoc_2
Motif
Other DBs
NCBI-GeneID:
89988979
NCBI-ProteinID:
XP_064720143
UniProt:
A0ABZ2AR01
LinkDB
All DBs
Position
3:join(1615788..1615808,1615857..1615922,1615974..1616033,1616084..1616134,1616191..1616383,1616437..1616618,1616676..1616981,1617031..1617105,1617159..1617247,1617302..1617329)
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AA seq
356 aa
AA seq
DB search
MSLWVDKYRPRTLDDLHYHDGLSSRLKSLAASGDFPHILFYGPSGAGKKTRIMCTLRELY
GPGVEKLRIDQRVFVTPSNRKLDVNVVQSNYHIELTPSDVGMYDRVVIQDILKEIAQTQQ
VDLNAKQRFKVVIINEADALTRDAQAALRRTMEKYMTNMRLILCANSTSKIIAPIRSRCL
LMRVAAPTDDEMTTVLNYVAKKERFTLPSPANNAILETSQGNLRKALLVFEAMRMQRPDL
SGDIEVAKPDWETYCGKVADAILQEQTAQRLLEIRAKIYELLSHCIPPTVVMKTISERLV
EKVDDTLKPQIVHWTAYYELRMRMGSKKIFHIEAFIVKVMTVYKQYTLMGFTEDFE
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtctctctgggtcgacaagtaccgtccacgaacgctcgacgatctccactatcacgat
ggcctctcatcgcgtttgaaatccttggctgcttctggagactttcctcacatcctcttc
tatgggccgtcgggtgctggcaagaagacaaggatcatgtgcactcttcgagaactttat
ggacctggtgtagagaagctccgaattgaccaaagagtctttgtcaccccttccaatcgc
aagcttgacgtcaacgtcgttcagtcaaactatcacatcgagctcacgccatccgatgtg
ggaatgtacgacagagtggtcatccaagatatcttgaaggagatagcacagactcaacaa
gttgatttgaatgccaaacagaggttcaaagtggtcatcatcaacgaggcggatgctctt
actcgagacgctcaagcagcattacgacgaaccatggaaaaatacatgaccaatatgaga
ctcatcctctgtgccaacagcacaagcaagatcattgctcctattagaagtcgatgttta
cttatgcgagtggctgcccctacagatgacgaaatgacaacagtcctcaattatgtcgcc
aagaaagaacgattcaccctcccctcccctgccaacaacgccatcctcgaaacatcccaa
ggcaatcttcgaaaggctctacttgtttttgaggccatgcggatgcaacgtcctgacctg
tctggtgacatcgaggtcgccaagcccgattgggagacatattgtggcaaggtcgcggat
gcgattttgcaggagcaaactgcgcaaagactgttagaaatccgggcaaagatctacgag
ttgttaagccactgtataccgccaacggtcgttatgaagaccatctcagaaagactagtt
gagaaggttgatgacacattaaaaccacaaattgtgcactggaccgcttactacgaactc
cgaatgcgaatgggatcaaaaaagatattccacatcgaggcatttattgtcaaggtgatg
actgtttacaagcaatatacacttatgggattcaccgaagactttgagtaa
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