Cryptococcus decagattii: 89989244
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Entry
89989244 CDS
T10966
Symbol
IAS62_002471
Name
(RefSeq) uncharacterized protein
KO
K13174
THO complex subunit 5
Organism
cdec Cryptococcus decagattii
Pathway
cdec03013
Nucleocytoplasmic transport
cdec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
89989244 (IAS62_002471)
09122 Translation
03013 Nucleocytoplasmic transport
89989244 (IAS62_002471)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdec03019
]
89989244 (IAS62_002471)
03041 Spliceosome [BR:
cdec03041
]
89989244 (IAS62_002471)
Messenger RNA biogenesis [BR:
cdec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
89989244 (IAS62_002471)
Spliceosome [BR:
cdec03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
89989244 (IAS62_002471)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Arabino_trans_N
NOCA1_mid
Motif
Other DBs
NCBI-GeneID:
89989244
NCBI-ProteinID:
XP_064720404
UniProt:
A0ABZ2AXC0
LinkDB
All DBs
Position
4:complement(join(333886..333966,334061..334175,334241..334316,334385..334464,334531..334892))
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AA seq
237 aa
AA seq
DB search
MAIPNIIQEQHPVDPLLLLPIPEKLPPSPLTALPSLISAFDPYIDASKASSSSPEDESIA
LPVLTSSMRQITRDAQVLLNAARLGAAEAREELDGVDVKLREVEYERNRVREETQRCMDY
ESAHEPIDLPNVETFLASVGQSVLDTLPPKDDEGYEYALTILQLEHELEEILKRESQVAQ
LTKDRDAYIRAKKEIKIKTDAVDVHLAGFARTANAVGSKVKDVAEVQAPSVSGPSAS
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggctatcccaaatataatccaagaacaacaccccgtagacccccttttactcctcccc
atcccagaaaaacttccgccatcacccctcacggcgttaccgtccctcatctccgcattc
gacccgtacatcgacgcttccaaagcttcttcctcgtcgcccgaagatgaatcaatcgca
ctccccgtgttaacctcatccatgcgtcagatcaccagggacgcgcaagtactactcaac
gccgcaagattaggcgcggcagaggcgagggaagagttggacggggtggatgtaaaattg
agagaagtggagtatgaacggaatagagtaagggaggagactcagcgttgcatggattat
gaatcggcacatgagccgatagatctgcctaatgtggaaacgttccttgcgagtgtaggc
caaagtgttttggatacattgccaccgaaagatgacgagggttacgaatacgctctcacc
atcctgcaattggaacacgagctcgaagagattctcaagagagaatctcaggttgctcag
ttgaccaaggatcgggatgcgtatattcgagcaaagaaggaaataaaaatcaagactgat
gcggtggacgttcacttggccgggtttgccagaaccgccaatgctgtaggctcaaaagtc
aaagacgttgcagaagtccaagctccttctgtttctggtccttccgcatcatga
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