Cryptococcus decagattii: 89989592
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Entry
89989592 CDS
T10966
Symbol
IAS62_002819
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
cdec Cryptococcus decagattii
Pathway
cdec03030
DNA replication
cdec03410
Base excision repair
cdec03420
Nucleotide excision repair
cdec03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cdec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
89989592 (IAS62_002819)
03410 Base excision repair
89989592 (IAS62_002819)
03420 Nucleotide excision repair
89989592 (IAS62_002819)
03430 Mismatch repair
89989592 (IAS62_002819)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdec03032
]
89989592 (IAS62_002819)
03036 Chromosome and associated proteins [BR:
cdec03036
]
89989592 (IAS62_002819)
03400 DNA repair and recombination proteins [BR:
cdec03400
]
89989592 (IAS62_002819)
DNA replication proteins [BR:
cdec03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
89989592 (IAS62_002819)
DNA Replication Termination Factors
ELG1-RFC complex
89989592 (IAS62_002819)
Chromosome and associated proteins [BR:
cdec03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
89989592 (IAS62_002819)
DNA repair and recombination proteins [BR:
cdec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
89989592 (IAS62_002819)
Check point factors
HRAD17(Rad24)-RFC complex
89989592 (IAS62_002819)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
AAA_14
AAA_22
nSTAND3
AAA_16
AAA_3
RCF1-5-like_lid
RuvB_N
Viral_helicase1
nSTAND_NTPase5
Mg_chelatase
Gp44_lid
Rad17
NTPase_1
MeaB
AAA_19
AAA_assoc_2
AAA_5
DNAX_ATPase_lid
RNA_helicase
KTI12
SRP54
NB-ARC
FtsK_SpoIIIE
AAA_28
AAA_30
Motif
Other DBs
NCBI-GeneID:
89989592
NCBI-ProteinID:
XP_064720749
UniProt:
A0ABZ2AYA0
LinkDB
All DBs
Position
4:join(1215931..1216013,1216069..1216287,1216341..1216442,1216498..1216693,1216743..1217069,1217127..1217243)
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AA seq
347 aa
AA seq
DB search
MASGSSSNNNVIPATAKHTDAEGYEMPWVEKYRPVLLDDIVGNSDTVERLKVIAEDGNLP
HIIISGMPGIGKTTSIHCLAHALLGEAYKEGVLELNASDERGIDVVRNKIKSFAQRKVTL
PPGRHKIIILDEADSMTAGAQQALRRTMEIYSNTTRFALACNMSSKIIEPIQSRCAILRY
SKLNDAEVLKRLKEICDMESVKHNDEGLAALIFTAEGDMRQAINNLQSTWSGFGFVSQDN
VFKICDQPHPIVIRQMIKDCQHGKIDEALARVNALWDQGYSAVDIVVTVFRVVKGMEELP
EYLKLEFIREIGWTHMRILEGVGTLVQLGAMIARLNKFALPPNTLKI
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcatccggatcctcatcgaacaataatgtcatcccggccacggctaaacataccgat
gctgaaggttacgaaatgccctgggtggagaagtatcgcccggtccttttggacgatatt
gttggcaactcggataccgttgaacggctgaaggtcattgccgaggatggtaacttaccg
catatcatcatctctggtatgccaggtatcggaaaaaccacttctatacactgcctggca
catgcgcttctgggagaagcgtacaaagagggggtgctggagctgaatgcatccgacgag
cgaggtatcgacgtggtccgaaacaaaattaagtcattcgcgcaaagaaaagtcaccctc
ccacctggaagacataaaattatcattcttgatgaagcggattcaatgacggccggtgct
caacaagcccttcgtcgaactatggagatctactccaacactactcgttttgccctcgcc
tgtaacatgtccagcaagatcattgaacctatacaaagtcgatgtgcaatcttaagatat
agcaagcttaatgatgccgaggtattgaagcgacttaaggaaatttgtgacatggagagt
gtcaagcacaatgacgaaggcctcgccgcactcattttcactgctgagggcgacatgcgt
caagcaattaacaatctccaatctacctggtcaggtttcggctttgtcagccaagataac
gtattcaaaatttgcgatcaaccccatcctattgttatccgtcaaatgatcaaagactgc
caacatggcaaaattgatgaagcccttgccagagtgaatgcgctttgggatcaaggatac
tcggcggtggatattgttgtgaccgtgttcagagtcgtcaaaggcatggaggagctgcca
gagtacttaaagttagagttcatccgcgagattggctggactcatatgcgtatccttgaa
ggcgttggaacgctcgtccaactgggcgccatgattgctcggttgaacaagttcgctctt
ccccctaataccctcaaaatatag
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integrated database retrieval system
