KEGG   Cryptococcus decagattii: 89989668
Entry
89989668          CDS       T10966                                 
Symbol
IAS62_002895
Name
(RefSeq) uncharacterized protein
  KO
K12881  THO complex subunit 4
Organism
cdec  Cryptococcus decagattii
Pathway
cdec03013  Nucleocytoplasmic transport
cdec03015  mRNA surveillance pathway
cdec03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cdec00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    89989668 (IAS62_002895)
  09122 Translation
   03013 Nucleocytoplasmic transport
    89989668 (IAS62_002895)
   03015 mRNA surveillance pathway
    89989668 (IAS62_002895)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cdec03019]
    89989668 (IAS62_002895)
   03041 Spliceosome [BR:cdec03041]
    89989668 (IAS62_002895)
Messenger RNA biogenesis [BR:cdec03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     89989668 (IAS62_002895)
    TREX complex
     89989668 (IAS62_002895)
Spliceosome [BR:cdec03041]
 Complex C
  Other components
   EJC/TREX
    89989668 (IAS62_002895)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    89989668 (IAS62_002895)
SSDB
Motif
Pfam: FoP_duplication RRM_1 Arm-DNA-bind_5
Other DBs
NCBI-GeneID: 89989668
NCBI-ProteinID: XP_064720825
UniProt: A0ABZ2AWL7
LinkDB
Position
4:complement(join(1422938..1422964,1423013..1423185,1423431..1423444,1423492..1423526,1423586..1423621,1423673..1423882,1423955..1423993))
AA seq 177 aa
MTSKMDIDRPLDEIIATKAKPRRPRQGGAGARRGGTASGATGARARYASTVPKTVAAPQP
FSAEVFKIIISNLPSDVTDAAVRDLMQSTVGPVKSEQGRCEEGTCLLMIDNQRPMKVELA
IDPNQARSSLVNRVAPAPAQPQKKRAPASKPRNPRPAKKTAEQLDAEMAEYKQSSTA
NT seq 534 nt   +upstreamnt  +downstreamnt
atgacttccaaaatggacattgaccgacccctcgatgagattatcgctaccaaggcgaag
ccacgtcgccccaggcaaggaggtgcaggtgcccggcgcggagggactgcgtctggcgcc
actggtgctcgagcgagatacgcttcgacagttcccaagactgtcgccgctcctcaacca
tttagtgccgaagtgttcaaaattatcattagcaatttgcccagcgatgtgactgacgcc
gctgttcgagatctcatgcagtctactgtcggacctgtcaagagcgaacaagggcgatgc
gaggaaggcacatgcctcttgatgatcgacaatcaacgccctatgaaggttgagcttgcc
attgaccccaaccaggcgcgatcttccctcgttaatcgggttgcgcctgctccagctcag
cctcaaaagaagcgtgctcccgccagcaagcctcgcaacccgcgcccagccaagaagact
gctgaacaattggatgctgagatggcggaatataagcaatcttcgactgcctaa

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