Cryptococcus decagattii: 89989681
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Entry
89989681 CDS
T10966
Symbol
IAS62_002908
Name
(RefSeq) uncharacterized protein
KO
K12878
THO complex subunit 1
Organism
cdec Cryptococcus decagattii
Pathway
cdec03013
Nucleocytoplasmic transport
cdec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
89989681 (IAS62_002908)
09122 Translation
03013 Nucleocytoplasmic transport
89989681 (IAS62_002908)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdec03019
]
89989681 (IAS62_002908)
03041 Spliceosome [BR:
cdec03041
]
89989681 (IAS62_002908)
Messenger RNA biogenesis [BR:
cdec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
89989681 (IAS62_002908)
Spliceosome [BR:
cdec03041
]
Complex C
Other components
EJC/TREX
89989681 (IAS62_002908)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
89989681 (IAS62_002908)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
89989681
NCBI-ProteinID:
XP_064720838
UniProt:
A0ABZ2AUQ4
LinkDB
All DBs
Position
4:join(1457049..1457291,1457352..1457469,1457535..1458004,1458080..1458628,1458682..1458884,1458937..1459048,1459101..1459562,1459612..1459659)
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AA seq
734 aa
AA seq
DB search
MEIHQSLLEPLNSILSAYPPQRSKPAPIPASELESKLSQAWETYSNDPSLMNGAAKNPDL
VRAVLELVGREFVVLSIVNGELTEPDEIANEKEKIAFQTALKDRLDITLTLYETVHRAFQ
EIPLLEPGALFIPLLEELVELLSVSTWRSLWSYVESRSKRFTKGMPASRGKALPLLRTIN
AFLRFLPRTPEDLVFRGRIHQFASSVFSVADKSAINMRGDYSEVKTIWEEEPKVEESKVD
EGKKEEKTEEKAEEEGKKDGDIEMEDAEKKDEPTERPDLDFYSTLWSLQQYFSHPPSLDG
PAVGSPRKTPFQTFRDKSDFVLPQLFEQTKKETAMTGTEDGMGKKRKREAMEGQDTGGFF
YPRFLTGKRLFEYELADSSFRRQILVQYFILFQFLLNLTPAHAGKQAFTGGMPRTFTLEQ
EDEQWVKSKIGGIKEELKRIIGGTSFEDTVFSIIRQEAHYVQWKNEGCPEGSFEIPALDP
DSASEPAHAWAKRLNPPAPYNFKVGSRPLSMLWNNGFTNINQLKGREKATTVEALDEEIK
RIEEDEEDDKAMGQDTPEKLAANKERKTTSTWRALRLASQTSLKFFPSLKEKRDIHLLLS
TIKKAQEPKGLAPKEDGEGEKEGGEGENENTGEGEELEDEDVQELKKEKEGEETEEKEKE
VVENAEEKGSAEIEKAEEEIKEEFAVDEVKIEEAGEGKEDKSDEKGSAEVEMVENEEQNV
ESKAHDDEVETSAA
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggaaatccaccaatcccttcttgagcctctcaactctattctatcggcataccctccg
caacggtcaaaacccgcgcccatccccgcttccgagctcgaaagcaaattgtcgcaagca
tgggaaacgtactcgaatgatcctagcctaatgaatggcgcggcaaagaatcccgacctt
gtaagagcagtgttggagcttgtcggaagggagtttgttgttttgagtattgtcaatggc
gagttgaccgaaccagatgagattgccaatgaaaaggaaaagattgctttccaaacggcc
cttaaggataggctggatatcaccttgactttgtacgagactgtgcacagggctttccaa
gaaataccactactcgagccaggagcacttttcatccctctccttgaagaacttgtcgag
cttctctctgttagcacttggcggagtctttggtcttacgtggaatcccggtccaagcgg
tttaccaaaggcatgcctgcctctcgaggaaaggccttgcctcttctgaggactatcaac
gcctttttgaggttcctgccccgaactccggaagatttggtcttcagaggaagaatacat
cagtttgcaagctcagttttcagcgtggcggacaagagcgcgatcaatatgagaggagat
tattcagaagtgaagacaatctgggaagaggagccaaaggtggaggaatccaaggtggat
gaggggaagaaagaagaaaagacagaggaaaaggcggaagaagagggaaagaaggatggt
gatattgagatggaagacgccgaaaaaaaggacgaacccacagagcgaccggatctcgat
ttttactctacactctggtcactccaacaatatttctcccatccaccttctcttgacggt
ccagcagtaggctcaccgcgcaaaacacctttccaaacctttcgtgacaaatcagacttt
gtcctccctcaattgtttgagcaaaccaagaaggaaacggctatgacaggtacggaagat
ggaatgggtaagaagcggaagagggaggccatggaagggcaggacacgggagggttcttc
taccctaggttcctaacaggaaagagactatttgagtatgagctggccgattcctctttc
cgtcgccaaatacttgtgcagtatttcattctgttccaattccttctcaatctcactccg
gcccacgctggcaagcaagcatttacgggtggcatgccgaggacgtttacgctcgagcag
gaggacgagcaatgggtgaagagtaaaattggaggcatcaaagaggaactgaagaggata
attgggggaaccagttttgaagatactgtgtttagtatcattagacaagaggcgcattac
gtgcaatggaagaatgaaggatgcccggaaggatccttcgagatccctgcacttgacccc
gactcggcttccgagccagcacatgcatgggcaaagcgtctcaacccacccgcgccatac
aacttcaaggtcggctcacgtccattatctatgctgtggaacaatgggttcaccaacatt
aatcagttgaaaggacgagaaaaggcgacaacggtggaagcgcttgacgaagaaatcaaa
aggattgaagaggatgaggaagatgataaggcgatgggtcaagacacccccgaaaagctt
gccgccaacaaagaacgcaaaacgacatccacttggcgcgcccttcgtctcgcttctcaa
acatcactcaagtttttccctagcctcaaagaaaagcgagacatccatctcttgctctct
acaatcaagaaggctcaggaacctaaaggtctcgcgcccaaagaggacggagagggcgag
aaggagggaggtgaaggcgagaacgaaaatactggtgagggtgaggagttggaggatgag
gatgtacaggaactgaagaaggaaaaagaaggggaagagacagaggaaaaagaaaaggag
gtagttgagaatgcagaggagaagggctcagccgaaatagagaaggcagaagaagagata
aaggaggagtttgctgttgacgaagtaaagatagaagaagcgggtgaaggaaaagaagac
aagtccgacgagaaggggtcagcagaggtcgagatggtcgagaatgaagaacaaaacgtc
gagtcaaaggcacatgacgacgaagtagagacatctgcagcttaa
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