Cryptococcus decagattii: 89989730
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Entry
89989730 CDS
T10966
Symbol
IAS62_002957
Name
(RefSeq) uncharacterized protein
KO
K12881
THO complex subunit 4
Organism
cdec Cryptococcus decagattii
Pathway
cdec03013
Nucleocytoplasmic transport
cdec03015
mRNA surveillance pathway
cdec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
89989730 (IAS62_002957)
09122 Translation
03013 Nucleocytoplasmic transport
89989730 (IAS62_002957)
03015 mRNA surveillance pathway
89989730 (IAS62_002957)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdec03019
]
89989730 (IAS62_002957)
03041 Spliceosome [BR:
cdec03041
]
89989730 (IAS62_002957)
Messenger RNA biogenesis [BR:
cdec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
89989730 (IAS62_002957)
TREX complex
89989730 (IAS62_002957)
Spliceosome [BR:
cdec03041
]
Complex C
Other components
EJC/TREX
89989730 (IAS62_002957)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
89989730 (IAS62_002957)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
YHR127W_C
RRM_11
DUF8400
Motif
Other DBs
NCBI-GeneID:
89989730
NCBI-ProteinID:
XP_064720886
UniProt:
A0ABZ2AW19
LinkDB
All DBs
Position
4:complement(join(1579765..1579788,1579844..1579943,1580011..1580203,1580262..1580364,1580629..1580676,1580766..1580966,1581038..1581163))
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AA seq
264 aa
AA seq
DB search
MDVDKSLDDIISDKKQPKPQQQRRPHAPRHSAGTAPRQTPYARLPPKSTSDKWTHDAYRG
PGAPRGGRPAAAPFRASVPLTTGSPVLSRESPRIEIIGLHYEVTAEDLKSIFSQAGEIVT
GPTIVYDRSGRSTGAAWMEYSNVQQAKTAINKFDGAMTKGQTISIRFAIPRFPPSSVRGR
PGAGRGAAPAQNLLSRIQGAPGTKAPAPAANDRGVKGGRGARGGRGRGGNAGGRPRRQDV
KPDDLDKELDSFMKQDAAGDVEMS
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggataaatctctcgacgacatcatttccgacaagaagcaaccaaagcctcag
cagcagcgaaggcctcatgctccacgacactctgccggtaccgcgcctcgacagacgcct
tacgccaggcttccccccaaatcaacttcagataagtggacccatgatgcctaccgcgga
ccaggcgcgcctcgaggtggtcgacctgcagcggcgccattccgggcgtctgtgcccctt
acgactggtagtcctgtattatctagggagtctccaaggattgaaattattgggttgcac
tatgaggttactgcggaagatttgaagtcgatcttttctcaagctggtgaaattgtcacc
ggccccactattgtttacgaccgctctggccgatcaacaggtgcagcttggatggaatac
tccaatgttcaacaagccaagacagcgatcaacaagtttgacggtgctatgactaaaggt
caaactatttcgattcggttcgccattcctcggttcccaccatctagtgtccgcggtcgt
ccaggtgctggacgcggtgccgcccctgctcaaaatttactttctaggattcaaggcgct
cccggtactaaggcccctgctcctgctgctaatgataggggtgtaaagggggggcgcggc
gctcgtggcggacgaggacgtggtggtaatgctggcggccgacctcgacgacaagacgtc
aaacccgacgatctggataaagaattggactcattcatgaagcaggatgccgctggtgat
gttgagatgtcgtaa
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