Cryptococcus decagattii: 89990026
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Entry
89990026 CDS
T10966
Symbol
IAS62_003253
Name
(RefSeq) pre-mRNA-processing ATP-dependent RNA helicase PRP5
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
cdec Cryptococcus decagattii
Pathway
cdec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
89990026 (IAS62_003253)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cdec03041
]
89990026 (IAS62_003253)
Enzymes [BR:
cdec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
89990026 (IAS62_003253)
Spliceosome [BR:
cdec03041
]
Complex A
U2 snRNP components
U2 related factors
89990026 (IAS62_003253)
Complex B
89990026 (IAS62_003253)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
TsaD
Motif
Other DBs
NCBI-GeneID:
89990026
NCBI-ProteinID:
XP_064721172
LinkDB
All DBs
Position
5:join(555481..555991,556048..556522,556576..556803,556853..557129,557179..557847,557898..558084,558135..558979)
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AA seq
1063 aa
AA seq
DB search
MPRSPYRSSNRGYRSPSPVRYDRSHPSSSSRRLDDRKASRFDDGYSRDRERDRERDRDYR
DRDRDYDRRRDRDRYRDDDRDRRRRDDRDDRRREERDRDSDRKRDSERRSPLPAIRVEPS
VSSASPAPETEEEKKRKAKERLETWKRQRALKEGKSATPESKSPAPPPVTSGLPPKPTAF
TLSRIGLPLKPTNPTPLKRSMTTLDDEDTSDRKLQKLDLPDFDPEVQSGDAPRVGSIGAD
LAVADGDEDDDTVVKKEEEKMDVDKKAEEEEEEDPLDAFMRDNVQQVVEVNKADAKRMGL
RIAEDGSDDEDRGQVVEKDKLAEAEALLQQAAAKSRKKDLPPPDHSKIDYEPFRKAFYVP
PVEVLEMDEEEAELMRLEMDGIKIRGQDAPKPVRNWGAFGLPQGCLDVIKHQGWETPTSI
QAQAIPAIMSGRDVIGIAKTGSGKTVAFLLPMLRHVRDQRPVSGSEGPIAVVMSPTRELA
TQIYKECQPFLKVLNIRASCCVGGSSISEDIAAMKKGAEVVICTPGRMIDLLTANNGRVT
NVRRTTYIVMDEADRMFDMGFEPQVMKIINNVRPNAQKVLFSATFPKTMESLARKILVKP
LEITVGGRSVVAPEIDQRVEVRDGDTKFTRLLEILGEMGEEHKDEDDFRALIFVDRQESA
DDLFRELLQRGYVCASLHGGKEQVDRDEAIKNFKNGDVPIIVATSVAARGLDVKELKLVI
NYDAPNHMEDYVHRAGRTGRAGNKGTCITFITPEQERFSVDIVRALEASKAFIPDDLKQM
SDSFLGKIKSGKARAAGSGYSGKGLERIERRREEKDRAEKTTYGDTSEALSLSSREGAVI
PYKAKTNEFKPPETSHKGDADYTFTEIKVDIINGPAPDRVPSQPVFNPKNAVASLPAQTL
AALEKAKKEGRGVDAANLANVVAKLTQSIELTKAEKLGLAAATSAPRLAPGARTKDPDAT
DWHAIFPINDYPQKARWKATNKEQMTLLQEVSGASITMRGRFYPPGEEPALGGEPKLSLL
IESNDEMRVRAAVEEIRRVLVEGSVQALNAVDRAGASGGRYAV
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgcctagatcaccatatagatcatcgaacaggggttatcgtagtccctcacccgtccgg
tatgaccgttctcacccgagctcctcttctagacgtctcgacgaccgaaaggcctcgagg
ttcgacgacggctactcgagggaccgagagagagatagggaaagggatagagactacagg
gatagagacagggattatgataggaggcgagatagggacaggtatcgtgacgatgaccga
gacagacggaggagagacgatagagatgacaggcggcgagaagagagagatcgggattct
gaccgcaagagagattctgagcgaagatctcctctgccagccattcgtgtggaaccgagt
gtatcgtcagcctcaccagcgccggaaaccgaagaggagaagaaacgaaaggcaaaggag
agactagaaacttggaagcgccagcgtgccttgaaggagggcaagtctgcgacacctgag
tcgaagagccctgcaccgccccccgttacctctggtctgccgcccaaacccaccgccttt
accctctctcgtattggtcttccgctcaaacctacaaatccaacgccactcaaacgtagc
atgactactcttgatgacgaagatacatctgaccgaaaactacaaaagctagacctacct
gattttgatcctgaagtccagtcaggagatgcgcctcgggtaggctccattggcgcagac
ttggcggtggcggatggcgatgaagatgatgatacggtggttaaaaaggaggaggagaag
atggatgtagacaagaaagcggaagaagaagaggaagaggacccgttggatgcgttcatg
agagacaacgtgcagcaggttgtggaagtgaacaaggccgacgccaagcgaatggggttg
cggattgctgaggatggcagcgatgatgaagatcggggacaagttgtggagaaggataag
cttgccgaggcggaagcattgttacaacaagctgcggctaaatcacgcaagaaggatctt
cctccccctgatcattccaaaatcgactatgaacctttccgcaaagctttctacgtaccc
cctgttgaagtattggagatggatgaggaagaggctgagttaatgcgtttggaaatggat
ggtattaaaatacgaggacaagatgctccaaagccagttaggaattggggcgcctttggt
ctgcctcaaggatgtcttgatgtgatcaagcaccaaggttgggaaacacccacttccatt
caagcccaggctatcccggctataatgtctggccgagacgtcattggtattgccaaaacc
ggttccggtaagactgttgctttcctcttaccaatgcttcgtcatgttcgcgatcaaagg
cctgtgtccggtagtgaagggccgattgcggttgtcatgtcacctactagggagttggcc
acccagatctataaagagtgccagccctttctcaaggtgctcaacattagggcgtcctgc
tgcgttggcggctcatccattagtgaggatattgctgctatgaagaagggtgccgaagtc
gttatctgcactcctggccgaatgatcgaccttctcaccgccaataacggccgcgtcaca
aatgtacgacgcaccacctacattgttatggatgaagcggaccgaatgtttgatatgggc
tttgaacctcaagtcatgaaaattatcaataatgttagaccgaacgctcagaaggttctg
ttctcggcaacattccccaagacaatggaatcacttgcgaggaaaatattggtgaagccc
ttggagattacagtcggaggcagaagtgttgttgcacccgaaattgaccagcgtgtcgaa
gtgcgtgatggtgatacgaagttcacacgtttgcttgaaatccttggtgagatgggcgag
gagcacaaggacgaagatgatttccgagcccttatctttgtcgaccgtcaagaaagtgcg
gatgatctatttagagagctgctacagagaggttatgtttgtgcttcactgcatggcggt
aaagagcaggtcgatcgtgatgaagctatcaaaaacttcaaaaatggtgatgtgcctatc
atcgtggcgacttctgtagcggcaagaggtttggatgtaaaagaattgaagcttgtcatt
aactatgacgcacctaaccacatggaagattatgttcaccgtgctggccgaacaggtcgt
gccggtaacaaaggcacttgtataacattcatcacgccggagcaggaaagattctccgtc
gatatcgtacgagctttagaagcgagtaaggcattcatccccgatgacctgaaacagatg
tcggattcattccttggcaagatcaagtctggtaaagcgcgagctgccggtagtggatac
agtggtaaaggccttgagcgaattgaacgccgacgggaggagaaagacagagccgaaaag
acaacctacggcgatacgtccgaagccctgtcactctcctcacgtgagggagctgtcatc
ccctacaaagccaagacgaacgagttcaagcctccagagacctctcacaagggcgatgcc
gactatacattcacagaaattaaggttgatatcatcaatggtcctgcgcctgaccgcgtt
ccctctcaacctgtatttaatccgaagaacgccgtagcctctctgccagcacagacattg
gcggcactggagaaggcaaagaaggagggccgaggcgtagatgcggcgaatctggccaat
gtggtggccaaacttactcaatctatcgaactcaccaaagccgagaaacttggcctggct
gcagccacctctgcacctcggcttgctccgggcgcgagaacgaaagatcccgacgctacc
gactggcacgctattttccccatcaatgattaccctcaaaaggctcgttggaaggcgacc
aataaggagcagatgaccttgctgcaagaagtctcaggagcaagtattacaatgcgaggc
agattttacccgcctggggaggagcctgcgttgggtggtgaacccaagctgagtttgttg
atagagagcaacgacgaaatgagagtgagggctgctgtagaggaaattcgaagggtgctg
gtagaaggatcagtacaagcgcttaatgcggttgatagggcgggtgcgagtggtggaagg
tacgctgtgtag
DBGET
integrated database retrieval system
