Cryptococcus decagattii: 89990255
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Entry
89990255 CDS
T10966
Symbol
IAS62_003483
Name
(RefSeq) uncharacterized protein
KO
K12597
protein AIR1/2
Organism
cdec Cryptococcus decagattii
Pathway
cdec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
89990255 (IAS62_003483)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdec03019
]
89990255 (IAS62_003483)
03016 Transfer RNA biogenesis [BR:
cdec03016
]
89990255 (IAS62_003483)
Messenger RNA biogenesis [BR:
cdec03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
89990255 (IAS62_003483)
Transfer RNA biogenesis [BR:
cdec03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
89990255 (IAS62_003483)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_4
AIR2-like_ZnK4
Motif
Other DBs
NCBI-GeneID:
89990255
NCBI-ProteinID:
XP_064721397
LinkDB
All DBs
Position
5:complement(join(1163457..1164458,1164512..1164676,1164735..1164908,1164963..1165103,1165160..1165636))
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AA seq
652 aa
AA seq
DB search
MTHYVPTSFKPMRSLVAAAGIQLSPSSPLDQDEGAIEAEDGELLLGNIIIDEFPADGDIP
ALEGEHFQPPGLFSTSMMPKIVNTGGKLHVELKTKDDEATIPEKDQGEGLMLPQHVLLET
SSAVQDAEDGDDDGEGGDRSLGGDDFLEGLHFVDDDITRGSRRYFNPEPEDDLEVEATFL
ATADSRKVCQNCKRPGHQASKCPHIICTTCGAMDEHERRDCPLSKVCYGCGRRGHHKSEC
PDPISRNKRWAGCERCGSREHTDKNCPTLWRIYTYRSDSGRRDAIKLKEKAEGWVKEAIG
GDAMEDWCYNCARTGHFGDDCPQRRGSLVRLTAPSAFSREIARRGPFFSAPKSSLPTPTH
SRWEDDDPSAIPYTSAYDSFAGSNAGRRGREKEKQRMMARDSDFNDEDDWFSGERNRNIG
KGAGTPRNNPRGGKGGKRPWDSEMRGREWDRDKYDRERASREFFDRDREPPRSRGQASSR
RRSRSPNRRDGSRHNAMQEAAPNSAPPKAVYRSAVKMGDGPMDSPSVREGERGAKAGSKA
LVSRALSGQSSNNSTPRGRKSSNSPSALPSLLSRIESPTPSNSSSRRREGRGKEQERDWE
NEWRRRGNGGGKVASWGKDFDKEIKGLTTKRKTKEDGTSRGSSGQKYYGGYM
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgactcattacgttccgacctcattcaagcctatgcggtctttagtggcggcagcaggt
atacagctgtctccatcgtctcctttggatcaggatgagggagcgatcgaagcagaagat
ggggagctgctcttgggtaacatcatcatagatgagttccctgcagacggtgacattccg
gctctcgaaggcgaacattttcaaccacctgggctattcagcacttccatgatgccgaag
attgtcaacactggcggaaaattacatgtggaactcaagacaaaagacgacgaagcaacc
attcccgagaaagatcagggggaagggttaatgttgcctcaacatgtattattagagacg
tcttcggctgtgcaagacgctgaagatggtgatgatgacggggaaggaggagatcgctca
ctagggggagatgatttcttggaaggccttcactttgttgatgatgatattacaagaggt
tcaagaagatacttcaatcctgagccagaagatgatctggaagtagaagcgactttcctc
gcgacagcagattctagaaaggtctgtcaaaattgcaagcgccccggtcatcaagcttca
aaatgcccccatatcatttgtacaacctgtggagccatggacgagcatgagcgtcgtgat
tgtccgcttagcaaagtttgctacggatgcggtcggcgaggtcatcacaaatcagaatgt
ccagaccccatttccaggaataagcgatgggcaggttgtgaaagatgtgggagtagagaa
catacggacaaaaactgtcccaccctgtggaggatttacacttaccgctcagattcgggc
cgacgtgacgcaatcaagttaaaggaaaaagccgaaggatgggtgaaggaggccatcggc
ggcgacgcgatggaggattggtgctacaactgtgctagaactggccactttggtgatgac
tgtccccaacgccgtggttctcttgttcgacttacggctccttcggcattttcccgagaa
atcgctcgacgcggaccattcttctccgctccaaaatcttccttacctactcccactcat
tctcgatgggaagatgacgacccttcggccataccgtatactagcgcttatgactcgttt
gccggatccaacgctggtcgtcgagggcgagaaaaggagaagcaacgaatgatggcacgc
gattccgatttcaatgacgaagacgattggttcagtggtgagcggaatcgtaatattgga
aagggcgccggtacgccgcgtaataatccacgaggaggaaaaggtggaaaacgtccttgg
gattcagaaatgcgagggagggaatgggatagggataagtatgaccgtgaacgggcttct
cgggaattctttgatcgagatcgcgaaccccctcgttctcgtgggcaagcgtcttctaga
cgtcgatctcgttcacctaatcgccgagacggctctcgtcacaatgcaatgcaagaggct
gcacctaactctgctccgcccaaagcagtttacaggtccgcagtcaaaatgggagacggg
ccgatggactccccttctgtacgcgaaggcgaacgcggagcaaaagcgggttcgaaagcc
ttggtgtctcgtgccttgagcggtcagagtagtaataattctacacctcgtggccgaaag
tcttccaattcgccatcggcccttccatctttactgagtagaattgaatcacccactcca
tcaaactccagttcgcgtaggagagaaggccgtgggaaagaacaagaacgcgactgggaa
aacgagtggagaagacgcggaaatggtggcggcaaggtggctagttggggaaaggatttc
gacaaggaaattaaaggattgaccaccaagaggaagacaaaggaagacggtacaagtagg
gggagtagcgggcaaaaatattacggcgggtatatgtaa
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