Cryptococcus decagattii: 89990624
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Entry
89990624 CDS
T10966
Symbol
IAS62_003852
Name
(RefSeq) ATP-dependent RNA helicase DBP2-A
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cdec Cryptococcus decagattii
Pathway
cdec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
89990624 (IAS62_003852)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cdec03041
]
89990624 (IAS62_003852)
03009 Ribosome biogenesis [BR:
cdec03009
]
89990624 (IAS62_003852)
Enzymes [BR:
cdec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
89990624 (IAS62_003852)
Spliceosome [BR:
cdec03041
]
Complex A
U1 snRNP components
U1 related factors
89990624 (IAS62_003852)
Complex B
89990624 (IAS62_003852)
Ribosome biogenesis [BR:
cdec03009
]
Eukaryotic type
Pre-60S particles
Helicases
89990624 (IAS62_003852)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
DUF2443
Motif
Other DBs
NCBI-GeneID:
89990624
NCBI-ProteinID:
XP_064721761
UniProt:
A0ABZ2AVI3
LinkDB
All DBs
Position
6:join(345092..345094,345152..345224,345277..345318,345373..345454,345534..345612,345665..346536,346591..346682,347075..347105,347159..347311,347360..347540)
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AA seq
535 aa
AA seq
DB search
MSYGGGYGGGGYGGGYGGGGGGGGYGGGYGGGGGYGGGFGGDRMGNLGQGLQNIDWQNQS
LAKFEKNFYVQDPRVTARSDAEVEAFRAEKEMKIQGKNVPRPITTFEEAGFPDYIMSEIR
RMGFTAPSSIQCQAWPMALSGRDVVAIAETGSGKTISFCLPAMVHINAQPLLAPGDGPIV
LILAPTRELAVQIQTEATKFGQSSRIRNTAIYGGAPKGPQIRDLQRGVEICVATPGRLID
MLETGKTNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLLFSATWPKEVQRLA
MDFLHDFIQVNIGSLDLTANHNVAQHVEVCTDFDKRSKLLGHLEKISQENGKVLIFVATK
RVADDLTKFLRMDGWPALAIHGDKQQAERDWVLAEFKSGRSPIMLATDVASRGLDVRDIG
YVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTMDNSKSARELVQILRESKADIPPEL
EEMAMYGGRGGGGGRGRGGRGGGRGGYGGGGRGGYSSGANSYGGGGGGGGYSSRW
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacggtggcggctacggtggcggtggttacggtggtggctatggcggtggtggt
ggtggcggtggctacggcggcggctatggtggtggtggtggttatggtggcggtttcggt
ggtgaccgaatgggcaaccttggtcagggtttgcaaaacattgactggcaaaaccaatct
cttgccaaatttgagaagaacttctacgtccaggacccccgagtcactgctcgttctgat
gccgaggtcgaagccttccgtgccgagaaggaaatgaagatccaaggcaagaacgttcct
cgacccatcactacctttgaggaggccggcttccccgactacatcatgtccgagatccga
cgaatgggtttcaccgctccttcttctatccagtgccaggcttggcctatggctttgtcc
ggtcgtgacgtcgtcgccattgccgagactggttctggtaaaactatctctttctgtctt
cccgccatggtccacatcaatgcccaacccctcctcgcccccggtgatggccctatcgtt
cttatccttgctcctacccgagagcttgctgttcagattcagactgaagctaccaagttt
ggtcagtcttcccgaattaggaacactgccatttacggtggtgctcccaagggccctcaa
atccgagacctccagcgaggtgtcgagatctgtgttgccactcctggtcgattgatcgac
atgctcgagaccggaaagaccaacctcaagcgcgttacttatctcgttatggacgaagcc
gaccgaatgctcgacatgggtttcgagcctcagattcgaaagattgtttctcagatccga
cctgaccgacagacccttttgttctctgccacttggcccaaggaggtccagcgtctcgcc
atggacttcctccacgactttatccaggttaacattggttctcttgaccttactgccaac
cacaatgttgcccagcacgtcgaagtctgcactgactttgacaagcgaagcaagcttctc
ggccacttggagaagatctctcaggagaacggcaaggtccttatcttcgttgctaccaag
agagtcgccgatgatttgaccaagttcttgaggatggacggctggcctgcccttgctatc
cacggtgacaagcaacaagctgaacgtgactgggttcttgccgagttcaagtctggccga
agtcctatcatgcttgccactgacgttgcttctcgaggtctcgatgttcgagacattggt
tacgttatcaactatgacttccccaacaactgtgaagattacattcaccgaatcggccga
actggtcgtgctggtcgaaagggtacttcgtacacttacttcactatggacaactccaaa
tctgctcgtgaactcgtccagattttgagggagtccaaggctgacatcccccctgagctt
gaggagatggccatgtacggcggtcgaggtggtggtggtggtcgtggccgaggtggccgt
ggtggtggtcgaggtggttacggtggtggtggccgaggcggctacagctctggcgccaac
tcttatggcggcggcggcggtggtggtggctattctagcaggtggtaa
DBGET
integrated database retrieval system
