KEGG   Cryptococcus decagattii: 89990648
Entry
89990648          CDS       T10966                                 
Symbol
IAS62_003876
Name
(RefSeq) uncharacterized protein
  KO
K14327  regulator of nonsense transcripts 2
Organism
cdec  Cryptococcus decagattii
Pathway
cdec03013  Nucleocytoplasmic transport
cdec03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cdec00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    89990648 (IAS62_003876)
   03015 mRNA surveillance pathway
    89990648 (IAS62_003876)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cdec03019]
    89990648 (IAS62_003876)
Messenger RNA biogenesis [BR:cdec03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     89990648 (IAS62_003876)
   mRNA cycle factors
    P-body specific factors
     89990648 (IAS62_003876)
SSDB
Motif
Pfam: MIF4G Upf2 LPD38
Other DBs
NCBI-GeneID: 89990648
NCBI-ProteinID: XP_064721785
LinkDB
Position
6:complement(join(409191..409234,409290..409431,409488..409805,409857..409918,409984..410074,410127..410192,410256..410413,410474..410765,410831..410980,411066..411146,411229..411411,411486..411554,411627..411737,411817..412887,412952..413215,413274..413473,413533..413623))
AA seq 1130 aa
MSSTADYVAKYPRRAALLHTVQKYWLDDARRPPGSLDSSLKKHTTLINKLKSSLLIGPAE
ALIKDIDGLTLTKYLDEIVAAVVEGAAKKGDPEVAVDVIVHLHSRLTPDFLPQLLQPLLV
LLSANAAVTGPIGKDGDKDKEKEDKERLSKQRPVLRIIAELAMVGAWAEGVVKGAAEIGK
VLKGLMTGDPQYSNLPLITTFLKYFGRAYLGDNPISSSQGPTGGAVKDDAETLPDGVTEL
VPPEVQKQMWQLFVNYFNTAGKTLVKGQLKLLEQDKRNHEAYIKSGEIFEDRQQAYEKMT
RAVERLTTGVQTLADLLNLTPPTLPTAASLSKSGLQIVESSSSFTVRDDGPIAGGIWDDE
EEQKFYQDLIDLKEVVPASLLGIKEKSKEDDQEGGGESQDKSEEEEENQQKAEEEALRKQ
LEQMELADSQAQPESEPEPEPQSQLQTLDRPASSSSLDSAAVAHEEEAQVHVEDEQAATV
PMTTTTATNAAIEEDGLQSGPAARLSALFAALPESNNREVVDKLAVEFAFLNSKAARKRL
IKFLGEVPKQRTDLLPHYARLIATLNPYMPDVGAGILGILDEELRYLQRKKLIRELDSTR
LKNVRYYGELAKFKVAKPFNILHVLKVFLDDFKFNIENISNLLETCGRFLLRYEGTAEVA
KRMVELMRKKQANMHLDQRHQLMLENAFYMCNPPERVAREVVQLTPMQSFIRHLLDEVLV
KRTRDKVLKLLRKLHWEDPEVYDFILSAFTDVWEVKFGNIPQLADLVFDLQRWHPEFGIA
VVDQVLENIRIDLEENIFKFNQRRIATMKYVGELYMYRVISASVIFEILWSLLSFGHVEP
MPFPGRESPIDAVDDFFRVRLACTLLDTCGICFPKGSQGRKLEQYLVMLQLYITCKTELP
MDVDFMLTDTLDLLRPKMPKLRTFAQAAAAVDELMATVGDMGGDDSASEDEEERQSPEEK
PEEPESVVENIQSMEDDDEDVVLIRDASKNDELDAEERAAFDREFAKILADTTDTRREQR
KAAPPIFDTAVPMVKKKIEEPKAKASNGNAEEEGRMQFMLMSKKAGKQQLRTLAIPVDST
IALNSKSQQAQSKAEQEQLKRLVLQNERRLERSEMEGIETRGVKLRFAHS
NT seq 3393 nt   +upstreamnt  +downstreamnt
atgtcctccacggccgactacgtcgcaaaatatcccaggagagcagctctcctccataca
gtacagaagtactggctcgacgatgccaggcgtccgcctggcagcctcgactcatctctc
aaaaagcatacaactcttattaacaaactcaaatcctcgctcttgatcggtcccgctgaa
gcattgatcaaagatatcgacggcctgacattgacaaaatatttggacgaaatcgtggct
gccgtcgtagaaggtgcggcaaaaaagggtgatcccgaggttgctgtggatgtaattgtc
catcttcattcacggcttacccccgattttcttccccaactccttcaacctcttttggtt
ctcttatcggcaaatgcagctgtcactggacctataggcaaagatggagataaagacaaa
gaaaaggaggataaagagaggttatcaaagcagagacccgttttgaggatcatagcagag
ttggcaatggtgggtgcttgggcagaaggagtcgtcaaaggtgcggcagaaattggcaaa
gtgctcaagggattgatgactggcgaccctcaatacagcaatctcccattaatcaccact
ttcctcaaatactttggccgagcctacttgggagacaaccccatctcgagcagccagggc
cccacaggcggtgctgtaaaagatgacgccgagacgctccctgatggtgttaccgaactt
gttccgccagaggttcaaaagcaaatgtggcaactattcgtcaattacttcaacactgct
ggcaaaaccttggtcaaggggcagctcaaacttctcgagcaggataaacgcaaccatgag
gcatacattaaatcgggagaaatctttgaagatcgtcaacaggcatatgaaaaaatgacg
cgtgccgtcgaaagactcactaccggcgtccagactctcgccgacctgctcaacctaacc
cctcccaccttgccaactgctgcatcactctccaaatctggtcttcagatagtagaatct
agttcttcattcaccgtccgtgacgatggccccatcgcaggcggtatatgggacgatgaa
gaggaacaaaagttttaccaagatttaatcgatctgaaagaggtcgttccagcttcctta
cttggcatcaaggaaaaatcaaaagaagatgatcaggaaggaggtggtgaatcccaggat
aaaagtgaagaagaagaggagaatcaacaaaaggcagaagaagaagctctccgcaaacag
ctcgaacaaatggaactggccgattctcaagctcagcccgaatccgaacccgagcccgag
cctcaatcccagcttcaaactttggatcgccccgcatcgtcttcatcactagactctgct
gctgttgcccacgaagaagaagctcaggttcatgtagaggatgagcaggctgcgacggtt
cctatgactacgacgacggcgacgaatgccgccatcgaagaggatggtttgcaatccggc
cctgcagcgaggttatccgccctctttgcagctttgccagaatcgaacaatagggaagtg
gtggataagttggctgtagagtttgcgtttttgaattccaaagcggcaaggaagaggctt
atcaagttccttggtgaagtgccaaagcaaaggaccgatttgttaccccattacgctagg
ctcattgcgacgctaaatccgtacatgccggatgttggcgcaggtatcctaggaattctg
gatgaagaattgagatatttgcagaggaagaaacttatacgagaattggatagcacacgt
ctcaagaatgtcaggtactacggtgaattggccaaattcaaggttgctaaacctttcaac
attctacatgtacttaaagtctttttggatgattttaaattcaatatcgaaaacatctca
aacctgttggagacttgcggaaggtttttactgcgatacgaaggaacagcagaagtggcc
aagcgtatggtggagttgatgaggaagaagcaagcgaatatgcatcttgaccagagacat
cagcttatgctggagaatgccttttacatgtgcaacccgcctgaaagagtagccagagaa
gtggtgcaactcactcctatgcagagtttcatccgacatctccttgatgaagttttggtg
aagcgaacgcgagacaaggtgttaaagctgctgagaaagttgcattgggaagatccagag
gtctacgactttatcctctctgcctttacagatgtttgggaagtcaagtttggtaatatt
ccccaactagccgatctcgtttttgatcttcagcgatggcaccctgaattcggcattgcg
gtcgtcgatcaggttttggaaaacattcgaattgacttggaggaaaacatcttcaagttc
aatcagagaagaatcgcgacaatgaagtacgtcggagagctgtatatgtacagagtcatc
agcgcctctgtcatctttgaaattctctggtcacttttgtcttttgggcatgtcgagcca
atgccatttccaggccgcgaaagccctattgatgccgtagatgactttttccgggtccgt
ttggcttgcacattactcgatacctgtggcatatgttttcccaaaggttctcagggacgc
aagttggaacaataccttgtcatgcttcaactctacatcacatgcaaaaccgagctacca
atggatgttgactttatgttgacagatactctcgaccttttgcggcctaaaatgcccaag
ctaaggacatttgcgcaagcagctgctgctgttgatgagttgatggcaacagtaggcgac
atgggtggggacgatagcgcatccgaagacgaagaggagcgccaatcacctgaagaaaag
cctgaagagccggaatctgtcgttgaaaacatacagtcaatggaagatgacgatgaggat
gtcgtcctcatccgcgatgcctccaaaaatgatgagcttgatgccgaagaacgggctgcc
tttgaccgggagtttgcgaaaatattggcagatactactgataccaggcgagaacagaga
aaggcagccccaccgatctttgacactgctgtgcctatggtgaagaagaagattgaagaa
cccaaagcaaaagcgagtaacggaaatgcggaggaggaggggaggatgcagttcatgtta
atgtccaagaaggcaggaaaacagcagttgcgaacgttggccatccctgtggattccacc
attgccttgaactccaagtctcagcaagctcagagtaaagcagagcaagagcagctcaag
agactggtattgcagaatgaaagaaggttggaaaggtcagaaatggaaggcattgagaca
agaggtgtgaagctccgttttgcacattcataa

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