Cryptococcus decagattii: 89990689
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Entry
89990689 CDS
T10966
Symbol
IAS62_003917
Name
(RefSeq) uncharacterized protein
KO
K06100
symplekin
Organism
cdec Cryptococcus decagattii
Pathway
cdec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cdec00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
89990689 (IAS62_003917)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdec03021
]
89990689 (IAS62_003917)
03019 Messenger RNA biogenesis [BR:
cdec03019
]
89990689 (IAS62_003917)
Transcription machinery [BR:
cdec03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
89990689 (IAS62_003917)
Messenger RNA biogenesis [BR:
cdec03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
89990689 (IAS62_003917)
U7-dependent histone pre-mRNA processing factors
89990689 (IAS62_003917)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
89990689
NCBI-ProteinID:
XP_064721826
UniProt:
A0ABZ2AW04
LinkDB
All DBs
Position
6:join(518097..518415,518472..518767,518813..519475,519525..519671,519732..520036,520083..520950,521009..521174,521223..521605,521662..521679)
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AA seq
1054 aa
AA seq
DB search
MSLYADDDPTKALQLTDEQPTLQPPTDPQQALNAALALDSESPEQQEGLQNAAQRFEEHP
ERLPEVIPRLLGLITEGGDSLLRFWTLDMIALTVGRSGLMLDVKLHVAQYCLTALNKLLH
SDSIPTIKAVIPILSTIYPILFRLLATSRPSQQVLDLFNVTKSKIISFALDPNARPFNVG
IKAVAWKFVQRVLLAATRAAGSDPRLPQRGAGSNDVNVSHIVPNGCLSASDIEKEGTLLQ
TQLVTHLYSSSEPAILHPLINTLPAIAKMRPTLAPLVVHSLASWTPSALVAAGRSAMEIR
AVDKTVRIAISHLLRHPPLSAHAAQLNDALVRQKARMEAAFIGEALARKERRQNLKHTID
PEAAFEAESSEQAAKRARLDGLVGVGSGMAKGPEIDVSGMRLEEVVEVVLSSLRSVSLEL
LTGTIENAKRALQENSTDAQPLLIAALGVSGIVKEEEEEEILNPLDMEDDDDDLLMDGPE
PLIEEEEPTSFTDFVLPAPEPLGPSDKEFIFSDTIERIWQTGADLASLPDPKDSDATKLA
VKPKEMWMLLLARLATRGADVKRKVICDFIIADFANRSKFASVWLNEEWYNEKIGVSSPG
QYLSNLEAIVTAYLPKVDSKDKSLSTFILTLPAIPPSLISTLETICQEPERALVGFLALR
DIVEVRPPVRPQALQTLLELCTHSDRKIRVMAIITTVRRWGNDSPMMPFLTKYALGVLWR
LANDDVKSEDVDMEEGEQADEKIQSKFLGEPNADNVQQHVELAFALAKRKQDLLDDIFRL
YPRLEPAVQDVVEAQLMPLIQSLGATEKLLEILRKFPNGADKLVMRVVGVLSAEGSKTLV
TLMKTLLSERDLDPRFVIPIVGDLDKAEIEKQLPRIVSLLGDANSKDMVKTAFASMLQKM
TPSDLMVALHQEGAPLKLTIEAIGICFSMTTVFRSDVLANAMSRIADLSTIPLIFVRTII
QVVTTYKSLAPFIANHILPKLVTKKIWEIPQLWDGFIMLAKRIAPASFGALLQLPKEQLK
EVVEKQPGLKSGLKGFLANKPGSKAAMAEIFGDD
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgtccctctacgccgatgatgacccgaccaaagccctccagctcacagatgagcagcca
actcttcaaccgcctacggacccccagcaagccctcaatgctgctcttgcccttgattca
gagtcaccagaacaacaagaaggccttcaaaatgcggctcaaaggtttgaagaacatccg
gaaaggcttccagaggtgataccgcgcttgttgggactcatcacagagggaggagattcg
ctgttgcggttttggacgctggacatgattgctttaacagtcggaaggagtggattaatg
ctggatgtaaaattgcatgtcgctcaatattgtttgacggcactgaataaacttcttcac
tcggactcgattccgacgattaaggctgtcattcctatattatccaccatatacccgata
ctttttcggctacttgctacttccaggccaagtcaacaagttttggatctgttcaatgtg
acgaaatctaagattatctcgtttgctttggacccaaatgcgcgaccatttaatgtcggc
atcaaggctgtggcgtggaaattcgtgcagagagttctgttggctgctacgagagctgcc
ggatcagatcctagattaccgcaaaggggagcagggagcaatgatgtgaatgtgtcgcac
attgtgcccaacggttgtttatctgcgtccgacattgaaaaggagggcactcttcttcag
acacagctcgtaacccatctgtactcttcttcagaacccgccattcttcatccacttata
aatacccttccggctatagcgaaaatgcgacctacccttgccccccttgttgtacattcc
ctagcgagctggacgccctctgctctagtagctgctggcagatcagcgatggaaatccga
gcagttgataaaaccgtgaggattgcgatcagtcatttgcttcgccacccccctttgtcg
gcgcacgctgcccaacttaacgatgcccttgttcgccaaaaagctaggatggaggccgct
ttcataggcgaggctttggctcgtaaagagcgccgtcaaaatctcaaacatacaattgat
cctgaggctgcatttgaggccgagtcaagcgagcaagcagccaaacgggccaggttggac
ggcctggtaggtgtgggaagtggaatggccaaaggacctgagattgatgtgagcgggatg
aggctcgaagaggtggtagaggtagtcctcagcagcttaaggagtgtgagcctggagctg
ctcactgggaccatagagaatgcaaaacgagctctgcaagaaaattctaccgatgctcag
ccgctcttgatagccgcattgggtgtcagcggtatcgtcaaggaagaagaagaagaagag
atcttgaatccgttagatatggaggatgatgatgacgatttattgatggatggcccagaa
ccgcttatagaagaagaagaaccaacgtccttcacggatttcgttcttcctgcccctgaa
cctcttgggccgtcggacaaggagttcattttttcagatacaattgaacgaatatggcaa
acaggtgcagacctcgcgagtctcccagaccctaaagattctgatgcaacgaagttggca
gtaaagccgaaagaaatgtggatgctattactagcccggttagcaacaaggggggcagat
gtgaagaggaaggtcatctgcgatttcatcattgccgactttgctaatcgatcaaaattt
gcttcggtgtggcttaacgaagaatggtataatgaaaagatcggtgtttcctcgcctggc
caatatctgtccaacctcgaagctatcgtaactgcctacctcccaaaggttgactcaaaa
gataaatctctttcaacctttatcctgacacttcccgcaattcctccttctctcatctcg
actctcgagacgatttgtcaagaacctgaacgggctcttgtggggtttctggctttgcga
gatattgtggaggtcaggccacccgtcagacctcaagctctacaaaccttattagagctt
tgtacacattctgacaggaaaattcgcgtaatggcgatcatcaccaccgttcggcgatgg
ggtaatgattccccaatgatgccatttcttaccaaatatgcgctcggagttctttggcga
ctcgccaatgatgacgtcaagagcgaagacgtggatatggaggagggcgaacaagctgat
gaaaagatccagtcgaagttcttgggagaacctaatgcggacaacgtgcaacagcatgtg
gagttggctttcgctcttgcgaagcgaaagcaagatctgttagacgacatattcaggctt
tatccccgtcttgagcctgcagtgcaagacgttgtagaagcacagctgatgccactgatc
caaagtctgggtgccactgaaaagctactggagattctacgaaagttccctaacggagct
gacaaattggtaatgcgcgttgttggagtgctaagcgcagaaggaagcaagacgctggta
actttgatgaagacattgctaagtgaaagagatttggatccaagattcgtgataccgatt
gtaggagatttggacaaggctgaaatcgaaaaacaactccctcgaattgtgtcccttctt
ggagacgcaaattccaaagacatggtcaagactgctttcgcttccatgcttcaaaagatg
actccatctgatctgatggtcgcattgcatcaagaaggcgcgcccttgaagttgactatt
gaagctatcggcatatgtttctctatgaccacggttttccgatccgacgtacttgccaac
gccatgtctcgcattgccgatctttctactatccccctcatctttgttcgaaccattatc
caagtggttactacctacaagtcccttgcacccttcattgcaaatcacatcctccctaaa
ctcgttaccaaaaaaatctgggagatcccccaactttgggacggcttcattatgcttgcc
aagagaattgctcctgccagttttggggctttattgcagctgcctaaagaacagcttaag
gaagtggttgagaagcagccgggattgaaatcgggcctcaaaggatttttggcgaacaag
cctggtagcaaggctgcgatggctgagatctttggtgatgactga
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integrated database retrieval system
