KEGG   Cryptococcus decagattii: 89990878
Entry
89990878          CDS       T10966                                 
Symbol
IAS62_004106
Name
(RefSeq) uncharacterized protein
  KO
K12580  CCR4-NOT transcription complex subunit 3
Organism
cdec  Cryptococcus decagattii
Pathway
cdec03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cdec00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    89990878 (IAS62_004106)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cdec03019]
    89990878 (IAS62_004106)
Messenger RNA biogenesis [BR:cdec03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     89990878 (IAS62_004106)
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     89990878 (IAS62_004106)
SSDB
Motif
Pfam: Not3 NOT2_3_5_C
Other DBs
NCBI-GeneID: 89990878
NCBI-ProteinID: XP_064722008
LinkDB
Position
6:complement(join(1032807..1032830,1032884..1033217,1033271..1033358,1033574..1034582,1034630..1035237,1035287..1035308))
AA seq 694 aa
MALRKLQAEIDRTLKSVATGVEVFEATFDKLNYATNTTQKDKLENDLKTQIKKLQRMRDQ
IKAWLGNGDIKDKTALLENRRLIETQMERFKALEKETKMKAFSKEGLIAQSKLDPAEKAK
RDMIDWIGSTTDELSRQIEQTEAEVESLQVGKKKKQAGERLDELEELNERREWHIGRLEV
VQRMLENGQLTVGDVEDIQEDVKYFLEANMEEDFDFDNGIYDELNLQDEEDFHDYLHEHP
SATDEPEPEPEPIVTTPAPKTIAKEKEDKKATPHRLSKSEPRDKEEEIPSSPVVLKKTPS
RKTTLDKDRRDKKDKEKEDKERKEHEREEKEREERSSSSQPTPSKPAPLPPIKYAAAAAA
AVGGSVSASAPSQATPSVPSESSRDESVASPDEIAAAPISAYLPPPPPGLSRSPSQAATP
QVSSPGTPGLQSRAPSTGPGTTDMTTPSQAPGSTLPPPGYPAPPSSSSAESSRAAAQAQV
AAEQAQVQAQAQAQALAQAQAQAQAQAQSQLSAAQIQAQLQAAQEVQGQAGVMGNLMQSF
EVAKEISKRRSDDANELHAALESSFANAPQQMDAEPPRYYHPQNPIKTPSYYPQSRLPIL
EDKSIYSRLELDQLFYIFYYMTGTYEQWLAARELKKQSWRFHKQYLTWFQRAHNPQAITS
DYEQGGYYYFDWENSWCQRRKSDFRFEYRWLSDH
NT seq 2085 nt   +upstreamnt  +downstreamnt
atggcgttaagaaaactgcaagcggagatcgaccgcaccctcaaatcagtcgctacgggt
gtggaggtgttcgaagctaccttcgacaaactcaactatgctaccaacacaacccagaag
gacaaacttgaaaatgatctcaagacccaaatcaagaagctccagcgtatgcgagatcag
atcaaggcttggctgggtaacggcgacatcaaagacaagacggcgttgctcgaaaacagg
cggttgattgaaactcaaatggaaagattcaaagcgcttgaaaaagaaaccaagatgaag
gctttctccaaggaagggttgatcgctcagtctaaactggatcctgccgagaaggccaag
cgagatatgattgattggatcgggtcaactaccgacgaactatcaagacaaatcgagcaa
acagaggcagaagttgaatctctccaggtgggcaagaagaagaagcaggctggagaaagg
ctggatgagcttgaagagctgaatgagaggagagaatggcatattgggaggctggaagtt
gtccagaggatgttggaaaacgggcaactaacggttggagatgttgaggatatccaagaa
gatgtgaaatacttccttgaagcaaacatggaagaagactttgactttgacaacggtatc
tacgacgaactcaatcttcaagatgaggaagacttccacgactatcttcacgaacatccg
tccgcaaccgatgaacccgaacctgaaccggagcccattgtcaccacaccggcaccgaaa
accattgccaaggaaaaagaagacaagaaagccacccctcacaggttgtctaaatctgag
ccccgagacaaggaggaggaaatcccttccagccctgtggtattgaagaagacaccgtca
agaaagacgaccttggacaaggataggagggacaagaaggacaaggagaaggaagacaag
gagcgcaaggagcacgaacgggaagaaaaagagagggaagaaaggtcttccagcagtcaa
cctaccccctccaaaccggctccacttcctcccatcaaatatgctgccgctgctgccgcg
gccgttgggggttctgtttctgcttctgcgccatctcaggcaactccttctgttccctca
gaaagttccagggacgagagtgttgcttctccggatgaaattgctgcagctcctatctct
gcgtacttgccaccaccacctccaggactttcgcgttcgccttctcaagctgctactcct
caagtctcctcccctggaacgccgggcctacagtctcgtgcgcctagcactggcccggga
acgactgacatgactactcccagccaagcgcccggaagcactctccctcctccaggctat
cctgcgccaccatcttcatcttctgccgagtcttctcgtgctgctgcccaagctcaagtt
gccgctgaacaagcgcaggtacaggctcaagctcaagcccaggcactcgcgcaggcccaa
gcccaagctcaagcacaggctcaaagccagctttctgctgctcaaatccaagcccaattg
caggctgctcaggaagtacagggtcaagcgggagtcatgggtaacttgatgcaaagcttt
gaggtcgctaaagagatttccaagcgacgctcagatgatgcgaatgagttgcatgccgct
ttggaaagtagttttgctaacgctcctcaacaaatggatgctgaacctcctcgctactat
catcctcaaaaccctatcaaaacaccatcgtactatcctcagtctcgacttcctatactc
gaagacaagtctatctattctcgtctcgaacttgaccagttattctacatcttctactac
atgactggcacatacgaacaatggctcgccgccagggaactgaaaaagcaaagttggagg
ttccacaaacaatacttaacttggttccagcgagcacacaacccgcaagccattacaagt
gattacgagcaaggaggatattactatttcgattgggagaacagttggtgtcagaggaga
aagagtgatttcagatttgaataccgatggttatcagatcattag

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