Cryptococcus decagattii: 89990879
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Entry
89990879 CDS
T10966
Symbol
IAS62_004107
Name
(RefSeq) DNA polymerase epsilon subunit B
KO
K02325
DNA polymerase epsilon subunit 2 [EC:
2.7.7.7
]
Organism
cdec Cryptococcus decagattii
Pathway
cdec03030
DNA replication
cdec03410
Base excision repair
cdec03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cdec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
89990879 (IAS62_004107)
03410 Base excision repair
89990879 (IAS62_004107)
03420 Nucleotide excision repair
89990879 (IAS62_004107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdec03032
]
89990879 (IAS62_004107)
03400 DNA repair and recombination proteins [BR:
cdec03400
]
89990879 (IAS62_004107)
Enzymes [BR:
cdec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
89990879 (IAS62_004107)
DNA replication proteins [BR:
cdec03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
89990879 (IAS62_004107)
DNA repair and recombination proteins [BR:
cdec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
89990879 (IAS62_004107)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
DNA_pol_D_N
Motif
Other DBs
NCBI-GeneID:
89990879
NCBI-ProteinID:
XP_064722009
LinkDB
All DBs
Position
6:join(1035637..1035669,1035719..1035790,1035848..1035917,1035968..1036029,1036087..1036208,1036255..1036336,1036383..1036769,1036820..1037335,1037384..1037646,1037696..1037714)
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AA seq
541 aa
AA seq
DB search
MVNQMRSAIVKVFSTKHSLTLPAPSLHYIEEVLMENEIPEDEWVVGLEFWAKEYLKAEDS
SSLVSLKALKKAYENLQLGTTEDTQIPDPSEVNVESHFSVVDSFSMPAIRYDPVRSGFVQ
SKVPPSVAGQASSRSTFLRERWAIIKEIILRNENFTPPAIGGHDRANYLKLTSIRNLLGR
AGQLFLLFGMLARNEEGKLCLEDGEGRVVLDMEDAVPGEGLFTEGCMVLIEGEYTAEETV
RVLAMGHPPSERRDIARSLHGHVDFLGGGAVSLKEEQKYNSTVLANTQISFVILSDVWLD
HSRTMPALRQMFEGYANTAEFRPMVFILCGNFCQDGWDGEEGLKRYTRGFNSLAELLQSI
PLLHSSHFVFVPGPSDPWSSTTLPRPSLPSAFTTRLSNRIPNAKFVSNPCRLKYFGMEIV
ICREDVMGKMMRNLVVVKEGEEINMKRYLVQTILDQAHLLPLPISVRPTLWEYDHALRLY
PMPSAVVLADKYERYELTYEGCHVFNPGKFVGGIGEDGWEFEWSMYYPATGRSERSVLTM
E
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatcaaatgcgttcagcgatcgttaaggtcttttcaaccaagcactccttaaca
ttgcctgccccttccctacactatattgaagaagttcttatggagaatgagattcctgag
gatgaatgggttgttggtctcgaattttgggcaaaagagtatttgaaagctgaagattca
tcatccctggtgtcattgaaagcattaaaaaaggcttacgagaaccttcagcttggcaca
acagaagacacacaaatcccagacccttccgaagtgaatgttgaatcacacttttccgtg
gtggactcttttagtatgcctgctataagatatgatcctgtgcgatcaggctttgtccaa
tccaaggttccaccttctgtcgctggtcaggccagttcaagatcgacctttcttcgcgaa
cgttgggccatcatcaaagagattatccttcgtaacgaaaactttacaccaccggctatc
ggtgggcacgatcgtgccaactatctcaaattaacgtctatccgcaacctcttaggccgt
gccggccagctttttttgttattcggaatgctcgcgcgcaatgaagagggcaagctatgt
cttgaagatggagaaggtcgagttgttctggatatggaagatgctgttcccggtgagggg
ctgttcactgaggggtgtatggtcttgatagaaggagagtacacagcggaggaaacggtt
cgcgtcttggcaatgggacaccctccgagtgaaagaagagatattgcaaggtccttacat
gggcacgtggactttctgggaggcggtgctgtgtctctgaaggaagagcaaaaatacaac
tccacagtacttgccaatactcaaatatctttcgttatactgtccgatgtctggctcgat
cattcgagaaccatgcctgccctgcgccaaatgtttgaggggtatgctaatactgccgag
ttccgaccaatggtgtttatactctgcggtaacttttgtcaagacggatgggacggcgag
gaagggctcaaacgatatactcgagggtttaattctcttgcagagctccttcaatccatt
cctctgcttcattcttcacattttgtctttgttcccggcccttcagatccttggtcgagt
actacccttcctcgcccctctcttccttcagcattcaccacacgcttatcaaaccgtata
ccaaacgcaaaatttgttagtaacccatgtcggttgaagtactttggaatggagattgtg
atctgtagagaagatgtgatggggaagatgatgcgaaacttagttgtggtcaaagaaggg
gaggagataaacatgaagcgatacctcgttcaaactattctggaccaagcacatctcttg
cctcttcctatctctgtccgccccacactttgggaatacgatcacgctttgcgcctatat
cctatgccttctgccgtggtcctggcagacaagtacgaacgatatgagctcacttacgaa
ggatgtcacgtttttaaccctggcaagtttgtggggggaatcggagaagacggatgggag
tttgaatggagtatgtactatcctgcaacaggcagaagtgagagaagtgtcttgaccatg
gaataa
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