Entry |
|
Symbol |
IAS62_004265
|
Name |
(RefSeq) uncharacterized protein
|
KO |
K08734 | DNA mismatch repair protein MLH1 |
|
Organism |
cdec Cryptococcus decagattii
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:cdec00001]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
89991037 (IAS62_004265)
03460 Fanconi anemia pathway
89991037 (IAS62_004265)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:cdec03400]
89991037 (IAS62_004265)
DNA repair and recombination proteins [BR:cdec03400]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
89991037 (IAS62_004265)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
7:join(134065..134184,134243..134553,134607..134700,134759..134881,134927..135107,135157..135250,135302..135455,135511..135952,136007..136121,136189..136345,136404..136565,136658..136957)
|
AA seq |
750 aa
MSEDSMDIDLQPEVEEIEPEGPKPIRKLTKDVINQIAAAEIIHRPSNAIKELLENSLDAG
STSIKISVKDGGLKLLQITDNGHGINKDDLPLLCERYATSKLQKFEDLQSLGTYGFRGEA
LASISYCSHVEVVTKTKNEGCGWKAHYQDGSLIPAKPGGTSDPKPAAANDGTVITAADLF
YNMPLRKRAFKSTSDEYNRIIDVVTKYAIHNPHVAWVGSNTKANIAALYTSALANELLEI
PDTELQPARLGAKLTGWVSNANSSWSKKGGWLLFINNRLVDSNKLKKAIEGHYTSYLPKG
ASPWVYLSLQIDPAKIDVNVHPTKSEVRFLNEDEIVDAVVQAVQTALEGANLSRSFTVQT
LLPGAPTPLGKHESSNSLIASASFSARKAAPNYKVRMDPSNRTLDSMFTVIDPSQLSGFV
EDEESQEQERPAKRRNVDSESQGDEPIMLDDDEEDNEGQAEEGERERVFVDEEENAKGKA
KEIEESLCHFTSIQSLRRAVKRDGNAELIEIFRRHAFVGVVDRYQCLSLIQHSTKLFLVN
HGALGDEHFYQLGLRQFGAFNRIRLDPAPQLKELLTLAAEDEAGLREAGLEVESVVDYVA
SLLRDRREMLDEYFSLLITEDGKVETLPMLLKGYTPNLDRLPQFLLCLGTQVDWDNEKGC
FQTFLCELAFFYSPRPFEDQPPPRTKDENMNEDEVEGIESTPEEIQHQLWQLEHVLFPSF
RRYTVWPKSCMAHVSQLADLPDLFRIFERC |
NT seq |
2253 nt +upstreamnt +downstreamnt
atgtcggaggattctatggacattgacctgcagccagaagtagaggaaatcgaaccagag
ggcccaaaaccaattcgtaagcttacaaaagatgttatcaaccagatcgctgctgccgag
attattcatcgaccatcgaatgctatcaaggaactcctcgaaaactcgctggatgcgggc
tcgacatccatcaagatatcagtcaaggatgggggtctaaagctcttgcaaatcaccgat
aacggtcatggcatcaacaaagatgaccttccgcttctatgcgagcgctacgcgacttca
aagctgcaaaagtttgaagatctccagtccttagggacttatggctttagaggagaagct
ctcgcaagtataagctactgcagtcacgttgaggtcgttaccaagaccaaaaatgagggg
tgtggctggaaagctcactatcaagacggcagcttgatacctgcaaagcctggaggtact
tcagacccgaagccagcggctgccaatgacggaacagtcatcaccgctgcagacctgttc
tacaatatgccacttcgtaagcgtgctttcaagtcaacttcagacgaatataaccgtatc
atcgacgtggtcaccaaatatgccattcataatccccacgttgcgtgggtcggttcgaac
accaaggcaaatatcgcggcgctctatacatctgcgttagccaatgagttgctcgaaatt
ccagatactgaactacaacctgctaggctaggtgcaaagctaacaggttgggtgagtaat
gcgaatagtagctggtcgaagaagggtggatggttacttttcatcaataatagattggtc
gattcaaataaattgaaaaaagctatagagggccactacacctcataccttccaaaaggt
gcttcgccttgggtatatctcagtctgcaaattgaccctgccaaaatcgacgtaaacgtg
catcccacaaagtcagaagtccgttttctcaatgaagacgaaattgtcgacgccgtggta
caagccgttcaaaccgctttggagggtgccaatctctcgcgttctttcactgtccaaact
ctccttcccggtgcacccacgcctttaggaaaacatgaaagttcaaattcccttatagca
tctgcatcattctctgcccgcaaagcagctccaaattacaaagtccgcatggacccttcc
aaccgcactctcgactccatgttcactgttattgacccttcccagctctctggtttcgtc
gaagatgaggaatcgcaggaacaggaacgacctgccaaaaggaggaatgttgactcagaa
tctcaaggtgatgagcccataatgctggacgacgatgaggaagacaacgaaggccaggcg
gaagaaggggagagagagagagttttcgtggatgaagaggaaaatgcgaaagggaaagcg
aaggagattgaggagagtttgtgtcattttacaagtatccaatctttgagaagggcagtc
aagagggatgggaatgctgaacttatcgaaatctttcgacgccatgctttcgtcggagtt
gtcgatcgatatcaatgtctttcgcttattcagcatagcacgaagctattcctagtcaac
catggcgcattgggcgatgaacatttttaccaacttggtcttcggcagttcggcgcattt
aaccgtatacgccttgatcctgcgccacaactgaaggagcttttgacattagcagcagag
gacgaagctgggctgcgtgaagcaggactggaagtagaaagtgttgtcgattatgtcgca
agtctgttaagagaccgccgggaaatgctggacgaatatttctctcttctcattactgaa
gacggaaaagtggagaccctccccatgttattgaaaggatataccccgaatcttgatcgg
ctccctcagttcttactatgtcttggaacgcaggtggattgggataacgaaaagggatgt
tttcaaacttttctttgcgaactcgcattcttctattcccctcggccctttgaagaccaa
cctcctccacgcactaaagatgaaaacatgaacgaagacgaggtagaaggtatagagtcc
accccggaagagattcagcatcagctgtggcagcttgaacatgtcttgttccccagcttc
agacggtacacagtctggccaaagagctgtatggcccatgtcagtcaactggccgatttg
ccagacttgtttaggatctttgaaagatgttaa |