KEGG   Cryptococcus decagattii: 89991372
Entry
89991372          CDS       T10966                                 
Symbol
IAS62_004600
Name
(RefSeq) pre-mRNA-splicing factor SYF1
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
cdec  Cryptococcus decagattii
Pathway
cdec03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cdec00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    89991372 (IAS62_004600)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cdec03019]
    89991372 (IAS62_004600)
   03041 Spliceosome [BR:cdec03041]
    89991372 (IAS62_004600)
Messenger RNA biogenesis [BR:cdec03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     89991372 (IAS62_004600)
Spliceosome [BR:cdec03041]
 Complex B
  Other components
   Prp19-related factors
    89991372 (IAS62_004600)
 Complex C
    89991372 (IAS62_004600)
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C Suf TPR_19 TPR_2 TPR_12 Mad3_BUB1_I
Other DBs
NCBI-GeneID: 89991372
NCBI-ProteinID: XP_064722492
LinkDB
Position
7:join(992864..993652,993705..994858,994907..994985,995032..995749,995811..996166)
AA seq 1031 aa
MASTSLVDTLTSYFPLTLPIPTPITHPHLIPPADLPVEEDLLHNPENLRSWLSYIHNVKE
KIAADEPAKSGVISPEEEILGPLASKNARDGLQRLVSIYERAIAVFPTSYKLWKAYYLTR
QSYVLGELTNDAKEARSQQAKRGAAYKTNVRELLDGAEEAHEWTGGLDPVVGYAEWRSLI
AAGERMIMCLPNLPIPWLLHLGVLLHPKCPSVFKNGSYARRTFDRALRTLPPSLHGRVWG
LYLRWAEVVGGDAGERVWRRYLKVDPSLTERHITYLLEADEPRPLAAAKYLLSIARRAQQ
NLYSSLEGKSPYQLFVDFLELVEKYADQIGMDEEETLELQKTKCTVEEKINGEQPPVEEQ
EQQSQDEPASVNGRLMRIAGPPVPLEQGKLFKPTNAASAQAPTQLAYDEDTDPSNSRLLD
VEGIVERDGLQVYKDQAGRLWTGLATYWIKKGEFERASATFEKGLAAVVTIRDFTQIFDA
YAEFSETMISTLMDALADEDNLEDEDFDAEETEQELDERMKSFEELMDRRPFLVNDVLLR
RNPNEVVEWEKRIALHGDDDAKVVETYVKALDIINPRKATGPLYPLYVNFAKFYEEGGSK
DDNGEPKNEPDLKQARKIFERAVKVPFKAVDELAEVWCEWAEMELRNENYEEAIRLMQRA
TTVPKNTKINYYDDNIPPQSRLFKSLKLWSYYSDLEESIGTVESTKAVYDKIMELKIANA
QVIVNYATFLEENKYFEESFKVYERGIELFHFPIAFEIWNIYLSKFVKRYGGKKLERARD
LFEQALENCPEKFCKPLYLMYAKLEEEHGLAKRAMGIYDRAASTVQDSDKFEMYTIYIAK
ATANFGLPATRPIYERALESLPDKQTAEMCRRFARMERKLGEIDRARAIYAHASQFCDPR
IEPEFWQEWNDFEIDTGSEDTFREMLRIKRAVQASFNTETSFIAAQAAAASKGTEKPTDA
SAQEAQEAADPMAAMERELNTVGADGARKGGAPAFVASTLNKTNVNGIDEEGKEAGEVAN
PDAIVMDEDEF
NT seq 3096 nt   +upstreamnt  +downstreamnt
atggcatccacatccctcgtagacacccttacgtcctacttcccactcacgctccccatc
cccacccccatcacccatccacacctcattcctcccgcagacctccctgtcgaagaagac
ctcctgcacaacccggaaaacctccgttcatggctttcctacatccacaacgttaaggaa
aaaatcgctgccgatgagcctgccaagagtggcgtgatttcccccgaggaagagatcctt
gggccattggcgagcaagaatgcgcgagacggattgcagcgattggtatcaatctacgag
cgagccatcgccgttttcccaaccagctacaagctctggaaagcgtattaccttacccgc
caatcctacgtgctaggagaacttaccaatgatgccaaagaagcacgatctcagcaggcc
aagcgcggtgccgcgtacaagaccaacgttcgagagctcttagacggagccgaagaagcc
cacgagtggacaggtggtcttgaccccgtggtcggttatgccgaatggagaagcttgatt
gcggctggtgaaaggatgatcatgtgtcttcccaacttgccaattccatggcttcttcat
ttgggcgtcttattgcatcctaaatgtccttctgttttcaagaacggctcgtacgcgagg
aggacgtttgatagggcgttgagaacattgcctcccagtctgcacggaagggtctggggc
ctgtatctccgctgggccgaggttgttggcggagacgctggtgagagagtctggagaagg
tacctcaaggtcgatccgagcttaacagaacgacacatcacctatcttctcgaagctgat
gagcctcgtcctctggcggctgccaaataccttctttccatcgctcgtcgtgctcaacaa
aatctctactcttctctggaaggcaaatctccttaccaactgtttgtcgactttttggag
ctcgtggaaaagtacgccgatcagatcggtatggacgaagaggaaacactcgagttgcaa
aagacaaaatgtacagtggaggaaaagattaacggggagcagccgccggttgaagaacag
gagcagcagtctcaggatgagcctgctagcgtcaatggccgtctgatgcgcattgcagga
cctcctgtcccacttgagcaaggaaaactcttcaaacctaccaatgccgcatcagcccaa
gctcccactcaattggcctacgatgaagataccgatccatcaaactctcgactacttgat
gtggaaggtatcgtcgagagagatggtctccaggtctataaggaccaagctggtcgattg
tggaccggtttggctacctattggattaagaaaggagaatttgaaagggcgtctgcgacg
tttgagaagggtcttgcagctgtggtgactattcgagacttcacccagattttcgacgcc
tacgccgaattctcggagaccatgatctccacactcatggacgctcttgctgacgaggat
aaccttgaagatgaagactttgatgcagaagagactgaacaggagttggatgagcgaatg
aagagttttgaggagttaatggaccgccgaccattccttgtcaacgatgtgctcctccgt
cgaaacccgaacgaagttgtcgagtgggaaaagcgtatcgcccttcatggcgatgatgac
gccaaagtcgttgaaacatatgtcaaggcactcgatattatcaacccccgaaaagccacc
ggacctctctacccgttgtatgtcaactttgccaagttctatgaagaaggaggaagcaag
gacgacaatggtgagccaaagaatgagcctgatttgaagcaagcgaggaagatctttgag
cgggcggtcaaagtgcctttcaaggcggttgatgaattagcagaggtttggtgcgagtgg
gctgagatggagttgagaaatgagaactacgaggaagcgattaggttgatgcagcgggcg
acaactgtccccaaaaacacgaaaatcaactattacgacgataacatccctccccaatct
cggcttttcaagtccctcaaactatggtcctactattctgaccttgaagagtctattggg
actgttgaatcaaccaaggcagtgtacgacaagattatggagctgaaaatcgccaacgcc
caagtcattgtcaattatgccacgttcttggaagagaacaagtactttgaggaaagtttc
aaggtgtacgaacggggaatagaattgttccacttccccatcgctttcgagatctggaat
atttacctctccaagtttgttaagcgttacggcggcaagaagctcgaacgtgcacgagac
ctgtttgaacaagccctcgaaaactgccctgaaaagttctgcaagcctctctacctcatg
tacgccaagctagaggaagagcacggtcttgccaagcgcgcaatgggtatctacgaccgt
gctgcgtcaaccgttcaagattccgacaagttcgagatgtacaccatctacatcgccaaa
gctactgccaactttggtcttcctgccacacgaccaatttacgagcgggccctcgaatct
ttgcccgacaagcagactgcggaaatgtgtcgacggttcgcgagaatggagaggaagttg
ggtgagattgatagagcaagggcgatctatgcgcatgcgagccaattctgtgatcccaga
attgagcccgaattctggcaagaatggaatgacttcgagatcgacactggatctgaagat
acattccgagaaatgctccgtatcaaacgagccgtccaagcgtctttcaacaccgagaca
tcgttcattgctgcccaggctgctgccgcgtccaaaggtactgagaagcctactgatgct
tcagctcaggaagcccaggaggcggccgatcctatggctgcgatggagcgtgaattgaac
accgttggtgctgatggcgcaagaaagggtggagcgccggcttttgttgcgagtacatta
aacaagaccaatgtcaacggaattgatgaagaggggaaagaagcaggtgaagttgcgaac
cctgatgcgatcgtcatggatgaggatgagttctaa

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