KEGG   Cryptococcus decagattii: 89991632
Entry
89991632          CDS       T10966                                 
Symbol
IAS62_004861
Name
(RefSeq) uncharacterized protein
  KO
K10754  replication factor C subunit 1
Organism
cdec  Cryptococcus decagattii
Pathway
cdec03030  DNA replication
cdec03410  Base excision repair
cdec03420  Nucleotide excision repair
cdec03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cdec00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    89991632 (IAS62_004861)
   03410 Base excision repair
    89991632 (IAS62_004861)
   03420 Nucleotide excision repair
    89991632 (IAS62_004861)
   03430 Mismatch repair
    89991632 (IAS62_004861)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cdec03032]
    89991632 (IAS62_004861)
   03400 DNA repair and recombination proteins [BR:cdec03400]
    89991632 (IAS62_004861)
DNA replication proteins [BR:cdec03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    89991632 (IAS62_004861)
DNA repair and recombination proteins [BR:cdec03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     89991632 (IAS62_004861)
SSDB
Motif
Pfam: RFC1 BRCT AAA Rad17 AAA_22 nSTAND3 AAA_30 RuvB_N AAA_16 AAA_14 AAA_5 AAA_33 AAA_28 AAA_24 AAA_19 AAA_18 AAA_assoc_2
Other DBs
NCBI-GeneID: 89991632
NCBI-ProteinID: XP_064722745
LinkDB
Position
8:join(401294..401374,401428..401439,401492..401671,401728..402000,402048..402241,402294..402461,402516..402839,402895..403011,403061..403307,403360..403485,403536..403621,403672..403719,403770..403907,403958..404114,404168..404433,404494..404656,404707..404858,404907..405015,405070..405234)
AA seq 1001 aa
MSPKADSPKKKPANKADQPAGKDIRGFFASGNSQKTGITKQVGTKSGSGKKPITIDDSDE
EPEKVLKEQSFSKVAPPSSASNSATSKHFGYKAIVLSSDEESAPAGSKSIAKSAPKVTSK
PIMTRKPALAKRKLLNDSESEEEGYKPQLKRRSLGGRAGKESDDEGTKSTEKGKRENDDD
FDPMDVEDDDEEYNFDDEDEPQQKPKPKSTAKKPLAAPKKSTPVKKPAAPKIAKTAEPEK
KEEKKFNWRAAAAARAAGPKAPGSKGIPEGTPDCLAGLTFVFTGEMESLGREDAQELVRR
YSGKVTTAPSGKTSYVVVGENAGVSKLNKVKEKKIPMINEDEFLELIRQRSGKGPGGTVD
KAAMEKASKAREKEEKKILEQAREMEEREKKEEKERIRKQKALEGQGMAVKKTGPASAQL
WTTKYAPTSLKEICGNKAPVERLGQWLKDWQNNYKANFKKPGKDGMGIYRAVLISGPPGI
GKTTSAHLMAKEAGYTPLELNASDTRSKKLIENETNVDNKSLDGFFKGQGIGQTNAAGLK
IGSRTCLIMDEVDGMSAGDRGGVGALNTLIRKTKIPMILICNDRTLQKMKPLQSTTFNMT
FRRPQPNEIRSRIMSILHKEKLKIPPNVVDELIKGVNSDIRQVLNMLSTFKLGKSEMNFD
EGKQLVKVNEKNTIMTPFTIIDKLTGPYAFSKNSKETLNDRIELYFHDFSFVPLFMQEHY
LKTNPTALNNLDGPEKNLKHLELVSKAADSISDGDLIDRMIHGSEQHWSLLPLHAVASTV
KPAMQVYGAMRSQGGGWGSWGPAFPQWLGQNSKQNKLQRQLTDIQIRMRLRVSGSREEIR
EQYMPLLASKIVSPLIDRGAAAVEETIEYMDEYYLGKDDWDAFVELGVDTMRDEDILKKI
PSATKASFTRQYNKTDHPIAFHKGDLFAGAKKKIDVGPVPDNEDVFEEDEPIPDEPEEDK
SEEEDPLQDKLIKAVKPKGKATAKSASKTTVSKGAKSKAMK
NT seq 3006 nt   +upstreamnt  +downstreamnt
atgtctccaaaagcagattctcccaagaagaagcctgctaacaaggctgaccaaccggcg
ggcaaggacattcgtggtttttttgcttcaggaaattcacaaaagactggcataacaaaa
caagtaggaactaaaagtggttcaggcaaaaagccgatcacgattgatgacagcgatgag
gagcctgaaaaggttctcaaggaacagtcgttttccaaagttgctcctccatcatctgca
tcaaacagcgctacatcgaaacactttggatacaaggcaattgtactatcttcggacgaa
gagtctgctcctgctggatcgaaatctattgctaaatctgcacccaaggtcacttccaag
ccaataatgacaagaaaaccggcattggcaaagcgcaaacttcttaacgactccgagtct
gaggaagagggctacaaaccgcagctgaagagacgaagtctaggaggaagagctggcaag
gaatctgatgacgaaggtacgaagagcaccgaaaagggaaagagggagaacgacgacgat
tttgatcccatggatgtcgaggatgacgatgaggagtacaatttcgacgatgaagacgag
cctcaacaaaagcccaagccaaaatcaactgcaaagaagcctcttgccgctcccaagaag
tctacgccagtcaagaaaccggcggcacctaagattgctaagacggccgaaccagagaag
aaggaggagaagaagtttaattggcgagcagcggcagcagcgcgtgctgctggtcctaaa
gctccaggatccaagggaatccctgagggtacccccgactgtcttgcaggccttacgttt
gtcttcacaggagagatggagagcttgggaagggaagatgcgcaggagctcgttagacgg
tattctggaaaggttaccacagctccttctggaaaaacttcttatgtcgtagttggcgaa
aacgctggtgtctccaaactcaacaaggtcaaggagaagaaaattcctatgattaacgaa
gatgaattccttgaacttattcgtcaaagatctggtaaggggcctggtggaacagtggat
aaggcggctatggagaaggccagcaaggcaagggagaaggaggagaagaagatcctggag
caggctagggaaatggaagagagggaaaagaaagaggaaaaggagagaataaggaagcag
aaggctctggaaggacaaggtatggctgttaaaaaaacgggtcctgcatcagcccagctg
tggactaccaagtatgctcctactagtttgaaggagatttgtggcaataaagctcctgtc
gaacgcctgggtcaatggttgaaagattggcaaaataattacaaggcaaatttcaaaaaa
cccggcaaagatggcatgggcatttatcgcgctgttctcatttctggtcctcctggtata
ggcaaaactacctctgctcatttaatggcaaaagaggccggttatactccattagaactg
aatgcgagtgatactcgaagcaaaaagctaatcgagaatgaaacaaatgtcgataacaag
agtttggatgggttcttcaagggtcaagggatcggtcagacaaatgccgcgggcttgaag
atcggctccagaacctgcttgatcatggacgaagtagatggaatgtccgccggtgacaga
ggaggtgtcggcgctctaaacacattgatcaggaagactaagatcccaatgatcttgatc
tgtaacgatcgtacattacaaaaaatgaagcctttacagagcacgactttcaacatgacg
ttcaggagaccccagccgaatgagattcgctcaaggattatgtctatcttgcacaaggaa
aagctcaagatcccacccaacgtcgttgatgaacttataaagggagtcaattctgatatc
cgtcaggtcctaaacatgctctccacgtttaagcttggtaagagtgaaatgaactttgac
gaagggaagcaattagtcaaggtcaatgagaagaacacaatcatgacgccttttactatc
atcgataaactcacaggcccatatgctttctccaaaaatagcaaagaaacattgaatgat
agaatagagctatatttccatgatttcagctttgtgccccttttcatgcaggagcattac
ctcaaaacaaaccctactgccttaaacaacctcgacggtcccgagaagaacctcaagcac
cttgaattggtatccaaggctgcggactctatatccgacggtgatctaattgatcgcatg
attcacggttcggagcagcattggtctctgttaccgctgcatgctgtagcgtctacggta
aagcctgccatgcaagtgtatggtgcaatgagaagtcaaggtggtggatggggcagctgg
ggtcctgctttccctcaatggctcggacaaaactcgaagcagaacaaacttcaaagacag
cttacggatattcaaattcgtatgcgtttgcgagtgtcaggaagcagagaggagattaga
gagcagtacatgccgctcttggccagcaagattgtatctcctctcattgatcgcggtgct
gcggctgtagaagagacgattgagtacatggacgaatattatcttggaaaagatgattgg
gatgcgtttgtcgaacttggtgtggatacgatgcgcgatgaggacatcctgaagaaaatc
ccaagcgctacgaaggcttctttcaccagacagtacaacaagactgatcacccgatcgcg
ttccataagggtgatttgtttgcgggggcaaagaagaagattgatgtcgggccagtgccc
gacaatgaggatgttttcgaagaagacgagcctataccggatgagcctgaagaggataag
agcgaagaggaggacccgttacaggataaattgatcaaggctgtaaagccgaaaggtaaa
gccaccgctaaatctgcatcaaaaacgactgtaagcaaaggagcgaagtcaaaagctatg
aagtag

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