Cryptococcus decagattii: 89992435
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Entry
89992435 CDS
T10966
Symbol
IAS62_005665
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
cdec Cryptococcus decagattii
Pathway
cdec03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cdec00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
89992435 (IAS62_005665)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cdec03000
]
89992435 (IAS62_005665)
03021 Transcription machinery [BR:
cdec03021
]
89992435 (IAS62_005665)
Transcription factors [BR:
cdec03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
89992435 (IAS62_005665)
Transcription machinery [BR:
cdec03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
89992435 (IAS62_005665)
RNA polymerase III system
TFIIIB
89992435 (IAS62_005665)
RNA polymerase I system
SL1/TIF-1B
89992435 (IAS62_005665)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-GeneID:
89992435
NCBI-ProteinID:
XP_064723540
LinkDB
All DBs
Position
10:join(588388..588563,588833..588920,588971..589243,589292..589433,589490..589509)
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AA seq
232 aa
AA seq
DB search
MSGLALPKASNAGPSGSNSKPEERQMLDGEGSIATRPPQKAVASVPEITAVDGLVPTLQN
IVATVNLDCRLDLKTIALHARNAEYNPRRFAAVVMRIRDPRTTALIFASGKMVVTGAKSE
DDSRLASRKYARIIQKLGFEAKFAEFKIQNMVGSCDVKFPIRLEGLAFSHGAFSSYEPEL
FPGLIYRMLKPKVVILIFVSGKIVLTGAKVREEIYMAFNQIYSVLLEFRKTT
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgtccggccttgcccttcccaaagcctcgaatgctggcccttccggctctaatagcaag
ccagaagagagacaaatgcttgacggggaaggatctattgccacaagaccaccacaaaaa
gccgtcgctagtgttccagagattacagcggtagacggtctagtgccgaccttacaaaac
attgtcgcaaccgtcaacctcgactgtcgtttagacttgaagactatcgcccttcacgct
cgaaatgcggaatacaacccaagacgtttcgctgccgtcgtcatgcgtattcgtgatcca
agaacaacggctttgattttcgcttctggaaagatggtcgtcaccggtgccaaatctgaa
gatgattctcggttagcatctcgtaaatacgcccgaatcatccagaagcttggttttgag
gccaagttcgccgagttcaagattcagaacatggtcggcagttgtgatgttaagttccct
atcagattggaaggtctggcattcagccacggtgcattcagcagttatgaaccagaactg
tttcctggcctgatttaccgtatgctcaagcccaaagtcgtcatcctcattttcgtgtcc
ggcaaaattgtcctcactggtgcaaaagtcagagaagaaatttatatggcgttcaaccag
atctactctgtgttgctcgaattccgaaagacgacataa
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