Cryptococcus decagattii: 89992955
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Entry
89992955 CDS
T10966
Symbol
IAS62_006186
Name
(RefSeq) uncharacterized protein
KO
K14407
cleavage stimulation factor subunit 2
Organism
cdec Cryptococcus decagattii
Pathway
cdec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cdec00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
89992955 (IAS62_006186)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdec03019
]
89992955 (IAS62_006186)
Messenger RNA biogenesis [BR:
cdec03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
89992955 (IAS62_006186)
U7-dependent histone pre-mRNA processing factors
89992955 (IAS62_006186)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
PHM7_cyt
DUF8400
RRM_11
RRM_RdRP1_2
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
89992955
NCBI-ProteinID:
XP_064724047
UniProt:
A0ABZ2B206
LinkDB
All DBs
Position
12:complement(join(543859..543885,544036..544181,544287..544692,544779..545281,545526..545584,545658..545720,545840..545855,545908..545938))
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AA seq
416 aa
AA seq
DB search
MPPNASKTVFVANIPYDVSEEQLANVFSEAGPVANVEIKFDANTGRSKGYAFVQFYDEAT
ALSAVRNLQDAPVNGRNLRVELSTDEPGPRRRGPGPGTVGVGAPSAGGPGVGGPSASLGG
PRPMVPAPGPSGAPPYGTASAGAPGYPPRAPFDPRYPQAHSQSHENTPPPPGVGARRQGG
DDIDLRMAPQGIDLPPGQKAVDTISKTLAGIAPGQMGDVMTSMKSLIQTNPDQARQLLSQ
QPQLAYALFQAMLLLNLIDPSVLSSIQPLAAPASASGTAPSGAAPVAPGPGVGANAGPGS
RAPNYPPYPPPVQAQGPPGGQQQAFRPPPQALYGGAPPLPNQNQNQNQSQNPPYPPYPSG
LASLPPAAQAALSTLPPDQQQMLLQVLQLSPVQIAALDPTQKASVMQLRQQFLGTA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccaacgcctccaagacagtcttcgtcgcgaacatcccatatgatgtatctgag
gaacagctcgccaacgtcttttcagaggctgggcctgtagccaacgtcgaaatcaagttt
gatgccaacactggtagatcaaaggggtatgcattcgtgcaattctatgacgaagcaacc
gccctttccgctgtgcgcaatctccaagacgcacccgtaaacggacgtaacctccgtgtg
gagctgtcaaccgatgaacctggtccccgccggcgcggtcctggtcctggcactgtgggc
gtgggtgctcctagtgcaggtggacccggagtcggtggaccctctgcatccctcggagga
cctcgccccatggttcctgctccaggcccaagtggtgctcccccctacggcaccgccagc
gctggcgcacctggttaccctccccgggcgccgttcgatccgcgctacccgcaagcccac
tctcaatcacacgagaacactcctcctccccccggtgtcggcgctagaagacaaggtgga
gatgatatcgacctaaggatggcgcctcagggtatagacttgcctccgggtcaaaaagcg
gtggatacgattagcaaaactttggcggggattgcgcccggtcaaatgggggatgttatg
accagtatgaagtcacttatccaaacaaaccctgaccaagcccgtcaactcctgagtcaa
caaccccaactcgcctacgccctcttccaagctatgctcctcctcaacctcatcgaccct
tctgttttgtctagtatccagccgttggcggctcctgcttccgcttccgggactgctccc
agtggagctgcgcctgtagcccccggtcctggtgtcggtgcaaatgcaggtccaggttca
cgggctccgaactatccaccatatccccctccggtccaagcccaaggtccaccaggcggc
cagcaacaagccttccgtcctcctcctcaagctctctacggaggcgcaccccctcttccc
aaccagaaccaaaatcagaaccaaagccagaaccctccttaccccccttacccctccgga
ctagcatccctcccccccgctgcccaagctgcgctctccaccctccctcctgaccaacaa
cagatgcttctccaagttttacagctctcgccggtgcagattgcggcattggatccgacg
caaaaggcttccgtcatgcaacttcgacaacaattcctggggacagcttag
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integrated database retrieval system
