Cryptococcus decagattii: 89993025
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Entry
89993025 CDS
T10966
Symbol
IAS62_006257
Name
(RefSeq) uncharacterized protein
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
cdec Cryptococcus decagattii
Pathway
cdec03022
Basal transcription factors
cdec03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cdec00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
89993025 (IAS62_006257)
09124 Replication and repair
03420 Nucleotide excision repair
89993025 (IAS62_006257)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdec03021
]
89993025 (IAS62_006257)
03400 DNA repair and recombination proteins [BR:
cdec03400
]
89993025 (IAS62_006257)
Transcription machinery [BR:
cdec03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
89993025 (IAS62_006257)
DNA repair and recombination proteins [BR:
cdec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
89993025 (IAS62_006257)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
89993025
NCBI-ProteinID:
XP_064724116
LinkDB
All DBs
Position
13:complement(join(35872..36095,36203..36341,36452..36592,36652..36998,37059..37518))
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AA seq
436 aa
AA seq
DB search
MPSPPSTLILILDTHPLSWHLLSHLPPAPALPDNKVLDTAKSSSTSLHQFITILIVFLNA
HLASKWGNEVVVYTASAGKATLIYPPSNDKLRQRGEGGKPNANVYRPFQVLDERIEEGLK
EVVREEQQKLDTEGPGFINEPPAMVSALTKALCFINRRILSSAHNDPTALPPSSDPNNNT
AGTSDGILPSKEVRIFVISATPGAVVGSRANADGGQGGGGVGTGFGDEDGAGKDNGDANE
EERGNQRRQQRMRGGYVGLMNCVFAAQKAKVPIDILSLPPSTIDSSPPIFLQQAAHLTDG
VYWQWNGRGGLLQYLHSIYLTPPSLRHHPFVTPPQDAVNFRAVCFCHHRTLDVGFVCSVC
LSIFCEPKPICAMCKTRFPIKSIPTLRALAGLNTRIRVPDTVVKPPAPKSSANTTGGKAG
VIGGKGDNRGEPIVID
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcccccccctccacgctcatcctcatcctcgacacccaccccctctcatggcat
ctcctctcacatctccccccagctcccgccctccctgacaacaaggttctcgacacggcc
aaatcatcctccacatctctccaccagttcatcaccatcctcatcgtctttctcaacgcc
catctcgcaagcaaatggggcaatgaagtcgtcgtctatacggcgtccgctggaaaggca
acattgatttaccctccttcaaatgacaagttacggcaaaggggagaaggaggaaagccg
aatgcgaatgtgtacagaccgttccaggttttggacgagaggattgaagaaggactgaaa
gaggttgtgagagaagaacaacagaaattggataccgagggtccggggtttataaacgaa
cctcccgccatggtctcggcgcttacaaaagctctatgcttcatcaatcggcggatatta
tcttcggcgcataatgaccctacagccctcccgccctcttcagatccaaataacaacacc
gcgggtacttctgacggcattttaccaagtaaagaagtgcgaatattcgttataagcgct
actcctggagctgtcgtgggaagtcgagcgaatgctgatggtggtcaaggaggaggcggg
gttggaactgggttcggggatgaagatggagcggggaaagataacggggatgcaaacgaa
gaagaacgaggaaatcagagacggcaacaacgcatgcgtggtggttacgtcggactaatg
aactgcgtctttgccgctcaaaaagctaaggttccgatagatatcctctcccttcctcca
tctacgatcgattcttcccctcccatcttcttacaacaagccgcccatctgacagatgga
gtgtactggcaatggaatggacgagggggtttgctccagtatcttcacagtatatatctc
acaccgccttctcttcgacatcatccgttcgtcacgccgccacaggacgcagtcaacttt
cgtgcggtgtgtttctgtcatcataggacattggatgtagggttcgtatgtagtgtctgt
ctttccatcttttgcgaaccaaaacccatctgcgcaatgtgtaaaacacggttccctatc
aaatctatccccacactccgggcgttggccgggttgaatacgaggatccgggttcctgat
acggttgtaaagcccccggcaccgaaatcgagcgcgaataccactgggggaaaggcaggg
gttataggggggaagggagataataggggtgagccgattgtgattgattag
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