Cryptococcus decagattii: 89993177
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Entry
89993177 CDS
T10966
Symbol
IAS62_006409
Name
(RefSeq) tRNA pseudouridine(38-40) synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cdec Cryptococcus decagattii
Brite
Enzymes [BR:
cdec01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
89993177 (IAS62_006409)
Transfer RNA biogenesis [BR:
cdec03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
89993177 (IAS62_006409)
Prokaryotic type
89993177 (IAS62_006409)
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
89993177
NCBI-ProteinID:
XP_064724264
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All DBs
Position
13:complement(join(436528..436702,436756..436815,436869..437158,437211..437364,437417..437707,437766..438056,438117..438149,438206..438531))
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AA seq
539 aa
AA seq
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MEHTDPTKRPRSPSPQQAEAPEAKRLHIEPAPVSAAVQVDAEEAMFNVEEEIQSGKGRRG
KRGNGGQARKEKKDKRDAKDPRAQRAWEPREKTDGEKRLPKRRCAVLIGYCGTGYQGMQI
QDHTDRTIEGEIFAALVKAGAVSADNAVDARKVDIARAARTDAGVHAAGNVISIKMITEP
PLPEGFKNVAEYVNTFLPDQIRMWGWVRTVKSFNARTAADSRIYEYLLPSYCLIPPHKDD
PLAKHLDISSPDWREIVGEDPCSFADARFPMPTSDEGEVDPKVRGEYERKRKWRVDEKTL
NRFRDIIAQYKGTHNFYNYTVGKPFNDRAVKRFMIKLEVKEPKVYGEIEWISVQIHGQSF
MLHQIRKMISMAMLACRTGSPPSLLPETFGPKKIHIPKAPPLGLLLEAPQFGVYNDRITQ
KLNGITEDRDPVNFGLYADEIYAFKVKWIYEMLRKEELEKNVFHKWIQMMDNIKNDSLGY
LNSKGVIPAEATALVLEQESKRREGQKTQKEGVEAGAEEIESDDEEVDQEALKRGDLEG
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggaacacacagatcccacgaagaggcccagatcgccatctccacagcaggcagaggca
ccagaggccaaaagactccacatcgaaccggcaccggtatctgctgcagtccaagttgat
gctgaagaagcaatgttcaacgtcgaagaagaaatccaaagtggtaaaggacgaaggggg
aaaagaggaaatggcggccaggctcgcaaagagaagaaagataaacgagatgccaaggac
ccgagggctcaacgagcttgggaaccgagagagaagactgatggcgaaaagcgattgccc
aagaggaggtgtgctgtgttaattggttactgtggtactggataccagggtatgcaaata
caagatcacaccgaccgaacaatcgaaggcgaaatcttcgctgctcttgtcaaagctggc
gctgtctctgcagataatgctgtcgatgcccgcaaagttgacattgctcgagctgctcga
acagatgccggtgttcacgccgctggcaatgtcatctccatcaaaatgatcacggaaccc
cctcttcccgaaggtttcaaaaacgtcgccgagtatgtcaacactttcttgcccgaccaa
attaggatgtggggctgggtgagaactgtcaagtccttcaacgcccgaacggctgccgac
tctcgtatatatgagtatcttcttccatcatactgtctgatacctcctcacaaagacgac
cctcttgccaagcatctcgatatatcctctcccgactggcgagaaatcgtcggtgaggat
ccttgttcctttgccgacgctagattccccatgcccacctctgatgagggtgaagtcgac
cccaaggtccgaggagagtatgagagaaagaggaagtggagagtggatgaaaagacttta
aaccggtttagggacatcattgcccagtacaagggtactcacaacttctacaactacact
gttggcaagccttttaatgaccgagcggtcaagaggtttatgatcaagcttgaggtgaag
gaacccaaggtatatggagagattgaatggatttccgtccaaatccacggacaaagtttc
atgcttcatcaaatccgaaaaatgatctccatggccatgctcgcttgccgaacaggttcc
ccgccctctctcctccccgagacattcggccctaaaaaaattcacattcccaaagctcct
cctctcggtctcttgctcgaggctcctcaatttggcgtctacaacgataggatcacccag
aagttgaatggtatcaccgaagacagagaccctgtaaactttggactctatgcggatgag
atctacgctttcaaggtgaagtggatctatgaaatgctgaggaaggaggagttggagaag
aatgttttccacaaatggatccaaatgatggacaatattaagaacgattctctcggttac
ctcaactctaaaggtgttatcccggcagaagccactgccctggtccttgagcaggagagc
aagcgaagagagggtcagaagactcagaaggaaggtgttgaagccggggctgaggaaatt
gagagtgacgatgaggaggttgaccaggaggccttgaagaggggtgatttggaggggtga
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