Cryptococcus decagattii: 89993200
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Entry
89993200 CDS
T10966
Symbol
IAS62_006432
Name
(RefSeq) uncharacterized protein
KO
K10756
replication factor C subunit 3/5
Organism
cdec Cryptococcus decagattii
Pathway
cdec03030
DNA replication
cdec03410
Base excision repair
cdec03420
Nucleotide excision repair
cdec03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cdec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
89993200 (IAS62_006432)
03410 Base excision repair
89993200 (IAS62_006432)
03420 Nucleotide excision repair
89993200 (IAS62_006432)
03430 Mismatch repair
89993200 (IAS62_006432)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdec03032
]
89993200 (IAS62_006432)
03036 Chromosome and associated proteins [BR:
cdec03036
]
89993200 (IAS62_006432)
03400 DNA repair and recombination proteins [BR:
cdec03400
]
89993200 (IAS62_006432)
DNA replication proteins [BR:
cdec03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
89993200 (IAS62_006432)
DNA Replication Termination Factors
ELG1-RFC complex
89993200 (IAS62_006432)
Chromosome and associated proteins [BR:
cdec03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
89993200 (IAS62_006432)
DNA repair and recombination proteins [BR:
cdec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
89993200 (IAS62_006432)
Check point factors
HRAD17(Rad24)-RFC complex
89993200 (IAS62_006432)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_11
AAA_14
DUF815
AAA_30
AAA_assoc_2
RCF1-5-like_lid
AAA_22
AAA_lid_RFC1
AAA_16
RuvB_N
nSTAND_NTPase5
AAA_5
AAA_3
ResIII
AAA_19
AAA_18
DEAD
AAA_7
AAA_28
ATPase_2
AAA_24
nSTAND3
bpMoxR
Mg_chelatase
Viral_helicase1
RNA_helicase
MCM
TIP49
AAA_25
Motif
Other DBs
NCBI-GeneID:
89993200
NCBI-ProteinID:
XP_064724287
UniProt:
A0ABZ2B2N4
LinkDB
All DBs
Position
13:complement(join(499602..499698,499861..499993,500125..500254,500364..500445,500551..500710,500784..500857,500949..501105,501177..501233,501317..501381,501452..501618))
Genome browser
AA seq
373 aa
AA seq
DB search
MTESMDIDTPIPSPASVVQPRNAMAALMVNAKGKGKEIAPPAADQKAVDDKQGLPWVEKY
RPVSLDDVVSHKDITGTIEKFIEAGRLPHLLFYGPPGTGKTSTVLALARRLYGSAYKKHI
LELNASDDRGIDVVREQIKNFAMTKVLFSKGFKLVILDEADMMTQAAQSALRRVIEQHTK
NVRFCILCNYVNKITPAIQSRCTRFRFSPLPEKEIQVKVDEVVQKEGVNLTEDGRDALLK
LSRGDMRRALNVLQACHAAYDIVDETAVYNCTGNPHPRDIERVVQSMMADEFGTAYSLIT
SLKIEKGLALQDLIAGAYEFLDTVELPKQSRIYLLDHLGSTEHRLSLGGSEKMQLTALLG
AFKVAVELSQRKV
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgacagaatcaatggacatagacacacccattcccagtccagcgtccgtcgtccagccc
cgaaacgcgatggcggcgctcatggtgaacgcaaaaggaaaaggaaaggagattgctccc
ccagctgcggatcaaaaggccgtggatgacaaacagggtcttccttgggtggagaagtac
aggcctgtttcgcttgacgacgttgtctcgcacaaggatattaccggtaccatcgaaaag
tttatcgaagccggacgactacctcatctcttattctacggacctccaggtaccggcaaa
acatccaccgtcctcgcgcttgcccgccggctatatggatctgcatataagaaacatatt
ctcgagttgaacgcttcagatgatcgagggattgatgtagtgcgagagcagattaagaat
ttcgcaatgaccaaggtgctattctcaaaaggtttcaagttggtcattttagatgaagcg
gatatgatgactcaagcagctcaatctgcacttcgtcgagtaatcgaacaacacactaaa
aacgtccgattctgtatcctctgcaactatgtcaacaagatcacccctgctatccaatct
cgatgtaccaggtttaggttctcacctctgcctgaaaaggaaatccaagtcaaggtggat
gaagttgtgcaaaaagaaggagtgaatctaacagaggatggtcgggatgcgcttctcaaa
ttatctcgaggcgatatgcgacgggccctcaacgtcctccaggcatgtcacgcagcgtac
gatatagttgatgaaacggccgtatacaactgtacaggcaacccgcacccgagggatatt
gagcgtgtggtgcagagtatgatggctgatgagtttgggactgcttactcccttatcacg
tctttgaaaattgaaaaaggtcttgcactgcaagatttgattgcgggcgcatacgaattc
ttagatactgtcgaactgccaaagcaaagtaggatatatttgctggatcacctgggaagt
acagagcatcgactatcgttgggcggttcagagaagatgcagctcacagcattattggga
gcgtttaaagtcgcagtagagctttcacagagaaaggtttga
DBGET
integrated database retrieval system
