KEGG   Cryptococcus decagattii: 89993365
Entry
89993365          CDS       T10966                                 
Symbol
IAS62_006597
Name
(RefSeq) uncharacterized protein
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
cdec  Cryptococcus decagattii
Pathway
cdec03018  RNA degradation
cdec03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cdec00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    89993365 (IAS62_006597)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    89993365 (IAS62_006597)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cdec03019]
    89993365 (IAS62_006597)
   03041 Spliceosome [BR:cdec03041]
    89993365 (IAS62_006597)
Messenger RNA biogenesis [BR:cdec03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     89993365 (IAS62_006597)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     89993365 (IAS62_006597)
Spliceosome [BR:cdec03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    89993365 (IAS62_006597)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 89993365
NCBI-ProteinID: XP_064724446
LinkDB
Position
14:join(320205..320216,320320..320446,320565..320636,320691..320774,320838..320863)
AA seq 106 aa
MSSRGGRGGARGGGNQGGERKKRESILNLAQFVDKSIRVKFMGGREATGILKGYDQLMNL
VMDDVVEEYEDGRPTRSLGLVVLRGPNIVLVSPTDGSSEIENPFQQ
NT seq 321 nt   +upstreamnt  +downstreamnt
atgtcttcaagaggcggccgaggcggagctcgtggcggtggtaaccaaggaggtgaacgt
aagaagcgagagtcaatcctcaacttggctcaatttgtcgacaagagtatcagggtcaaa
tttatgggtggacgggaagctaccggtatcttgaaaggctacgaccagcttatgaacttg
gtcatggacgatgtagttgaagagtatgaggatggccgacctactcgaagtcttggatta
gttgttctccgtggccctaatattgtccttgtcagcccaacagacggatcgtcagaaatc
gaaaaccctttccaacaataa

DBGET integrated database retrieval system