Corynebacterium dentalis: ACF3NM_00880
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Entry
ACF3NM_00880 CDS
T11993
Name
(GenBank) translation initiation factor IF-2 N-terminal domain-containing protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
cden Corynebacterium dentalis
Pathway
cden03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cden00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACF3NM_00880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cden03019
]
ACF3NM_00880
03009 Ribosome biogenesis [BR:
cden03009
]
ACF3NM_00880
Enzymes [BR:
cden01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
ACF3NM_00880
Messenger RNA biogenesis [BR:
cden03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACF3NM_00880
Ribosome biogenesis [BR:
cden03009
]
Prokaryotic type
rRNA processing factors
ACF3NM_00880
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
Motif
Other DBs
NCBI-ProteinID:
XID10228
UniProt:
A0ACH3BTI4
LinkDB
All DBs
Position
189244..192612
Genome browser
AA seq
1122 aa
AA seq
DB search
MANRAQKLAAQAAQINRTELGEKTRVHALAKMLGVSSNEMLSVLTSQGISDKRAASTVTK
QQVETVLDSLASDKNDEPKTAAKKTAKKAAKKTVKKTTKKTAKKSATKTTKKSTKKTAKK
AETKTSAESDVKVVEEPAVQGEQALESVSAEQLADGGATGEFVAVAEPAAEVAPQVAQAH
TESADEAKSEAEPEAENDPSDATVDQIIAPLFNNDGDADSSESVQKPKRRVRRVRRVVRR
VGVDAGTAADGSQPEKSDSAQTESDSAQSEDIQPGKSDAQNSDANETTPEKKGRGNNRNR
RRAKNNRRDDQTEDRNEDRADDQQGDSTEDNADQDPSDLHPAERDEADIVDEPVRFKGST
RLESRRRWKQENRKESRHVVSRSEFLARRESVDRVMVVRDSQRTDHEGLTTQVGVVEDGM
LVEHFVTSETQHSMVGNVYLGTVQNVLASMEAAFIDLGTGRNAVLYSGEMNWHSPHLHSK
NRRIDSALRPGDQIMVQVIKDPVGHKGARLTARVSFAGRYLVYFPGGTTAGISRKLPEAE
RKRLKGILSRVIPGEGGAIIRTAAENASEENIGEDVNRLHSAWENVLEQENKARSSKGSQ
PVTLYEEPNMLIKVIRDILNPDFSQLIVDGDKSWATVRDYVSRMAPDLKDRVVKWHPEQH
ADQDVFAGMELDEQLSKALSRKVWLPSGGHLVIDHTEAMTVVDVNTGSFIGSGGNLEETV
TQNNLEAAEEIVRQMRLRDLGGMIVVDFIDMVLEENQDLVLRRLTEFLGRDRTRHKVSEV
TSLGLVQMTRKRLGIGLLETFSTVCEHCGGRGVIVHADPVEHEEEEDTRLRRDHGHRKER
QQAKREKQRREEHKEERKETRKDDRKAPNKAEQKSESKPERKSERNHGKRDAEQPNKRAE
ESREHKQPREENKANGRGGSGSGATATQRRRVRRVVRRHAPADHQTSPDQTAGGKQKDSG
RGKSAQDAKQGSSSSRSASHRATSSADRVAAQRSESKRTKRRVRRVVRSAAPTIQQDQVQ
QDQAQRDRGQRNPQRRSAETRQSFAEAKAEFDSSPRRKRNTRGNSRSDIPPRPEDFQQQA
DAPKDDARKDSALKDTAQKPKEAKVASNKKRGRGRRVVRRSN
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
gtggctaatcgagcccaaaaactagcagctcaagctgcacaaattaatcgcacggaattg
ggggagaagacccgagttcacgcgttggcaaaaatgctgggagtatccagcaatgaaatg
cttagcgtcctgacttcgcagggcatcagcgacaagcgcgctgcctcgaccgtcaccaag
cagcaggtagagacagtgctggatagcttggcgtcggataaaaacgatgaacccaagacc
gccgccaagaagactgccaagaaggcggcgaagaagacggtaaaaaagaccaccaaaaag
accgcgaagaagtccgctacgaagaccactaagaagtccaccaagaagacggcgaagaag
gcggagacgaagacgtccgccgagtcggacgtcaaggttgtcgaagagcctgcggtacag
ggtgagcaggcgctggagtccgtatctgccgagcagttggctgatgggggagctaccggc
gagttcgttgcggtggcagagccagcggcggaggtcgcgccacaggtggctcaggcgcac
actgagagtgctgatgaagctaagtctgaggctgagcctgaggctgagaacgatccttcg
gatgccacggtggatcagatcatcgcgccgctgtttaacaacgatggcgatgcggattcc
tccgaatcggtgcagaagcccaagcgtcgggtgcgccgggttcgtcgtgtggtgcgacga
gtcggcgtggatgcgggaactgcagcagatggttctcagccggagaagtcagactcagca
caaaccgagtctgacagcgcgcagtcggaagacatccagccaggaaagtcagacgcgcag
aattccgatgcgaacgagaccaccccagaaaagaaggggcgtggaaataatcggaaccgg
cgtcgggcaaagaacaaccgacgagacgaccagacggaagaccgcaacgaagaccgcgct
gacgatcagcagggagacagcaccgaagataacgcggaccaggacccttcggacctgcac
cccgcagagcgcgatgaggcagacatcgtcgatgagccagtgcgcttcaagggcagcacg
cgattggagtcccgccgccggtggaagcaggagaaccgcaaggaatcccgccatgtggtg
agccgcagcgagttcttggcgcgccgggaatccgtggaccgcgtcatggtggttcgggat
tctcagcgcaccgaccacgagggtctgaccacgcaggttggcgtggtggaagatggcatg
ctggtggagcactttgtgaccagcgaaacccagcactcgatggtgggtaacgtctacctg
ggcaccgtgcaaaatgtgctggccagcatggaagctgccttcatcgacttgggtaccggc
cgcaacgcggtgctgtactccggcgagatgaactggcattctccgcacctgcacagcaag
aaccgccgtatcgattccgcgctgcgcccgggcgaccagatcatggtgcaggtcatcaag
gatcccgtgggccacaagggcgcacgtctgaccgcccgcgtgagctttgccgggcgttac
ctcgtgtacttcccaggcggcaccaccgcggggatttcccgcaagctgccggaggcagag
cgcaagcgcctgaagggaatcctctcccgcgtgatcccgggcgagggtggcgcgatcatc
cgcacggccgcggagaacgcctccgaggaaaacatcggcgaggacgtgaaccgcctgcac
agcgcgtgggaaaacgtgctggagcaggaaaacaaggcgcgttcctccaagggctcccag
ccggtcacgctctacgaagagccgaacatgctgatcaaggtgatccgggacatcctgaat
ccggacttctcccagctcatcgtggatggcgacaagtcttgggccacggtgcgggactac
gtcagccgcatggcgccggatctcaaggaccgcgtggtcaagtggcacccggagcagcat
gcagaccaggatgtcttcgctggaatggagctggacgagcagctgtccaaggcgttgagc
cgcaaggtgtggctgccatcgggcggtcacttggtgatcgatcacactgaggcgatgacg
gtggtggacgtgaacaccggctccttcatcggctccggtggcaacctggaagagacggtc
acgcagaacaacctcgaggcagccgaggagatcgtgcggcagatgcgcctgcgtgacctg
ggcggcatgatcgtggtggacttcatcgacatggtgctggaggaaaaccaggatctggtg
ctgcgccgattgaccgagttcttgggacgcgatcgcactcgccataaggtctctgaggtg
acctctctggggctggtgcagatgacccgcaagcgcttgggtatcggtttgttggagacg
ttctccaccgtgtgcgagcactgtggtgggcgtggcgtgattgtgcacgcagatcccgtg
gaacacgaggaagaagaggacactcgtctgcgtcgggatcatggccaccgtaaggagcgc
cagcaggccaagcgggaaaagcagcgccgtgaggagcataaggaagagcggaaggaaact
cgcaaggacgatcgcaaggctcctaacaaggccgagcagaagtccgagagcaagcctgag
cgcaagtccgagcgcaaccacggcaagcgcgatgctgagcagccgaacaagcgcgcggag
gagtctcgcgagcacaagcagccgcgcgaggagaacaaggccaatggccgcggtggttcc
ggcagtggtgccacggccacgcagcgccgtcgggtccgtcgtgttgtccgacgccatgct
cccgccgatcatcagacctccccagatcagactgcgggtggcaagcagaaggattccggt
cgcggaaagtcagcccaggatgcgaagcagggttcaagttcttcccgttcggcttcccat
cgcgccaccagctctgctgatcgcgtagccgcacaacgttcggagtccaagcgcaccaag
cgccgggttcgccgagtagttcgctccgctgcgcctacgattcagcaagaccaggttcag
caagatcaggctcagcgggatcgtggccagcggaatccgcagcgtaggtctgctgagacg
cggcagagttttgcggaggcgaaggcggaattcgattcctcgccacgtcgcaagcgcaat
actcgaggcaactcccggtcggatatccctccgcgtccggaggacttccagcagcaggcg
gatgcacctaaggacgatgcacgcaaggactctgcgctcaaggacactgcccagaagccg
aaggaggcgaaggtggcgtcgaacaaaaagaggggacgcggacggcgcgtggtacggcgg
tccaactag
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