KEGG   Cryptococcus depauperatus: 91084422
Entry
91084422          CDS       T10265                                 
Symbol
L203_100206
Name
(RefSeq) small nuclear ribonucleoprotein F
  KO
K11098  small nuclear ribonucleoprotein F
Organism
cdep  Cryptococcus depauperatus
Pathway
cdep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cdep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    91084422 (L203_100206)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cdep03019]
    91084422 (L203_100206)
   03041 Spliceosome [BR:cdep03041]
    91084422 (L203_100206)
   03032 DNA replication proteins [BR:cdep03032]
    91084422 (L203_100206)
Messenger RNA biogenesis [BR:cdep03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     91084422 (L203_100206)
Spliceosome [BR:cdep03041]
 Complex A
  U1 snRNP components
   Sm proteins
    91084422 (L203_100206)
  U2 snRNP components
    91084422 (L203_100206)
 Complex B
  U1 snRNP components
    91084422 (L203_100206)
  U4/U6.U5 tri-snRNP components
    91084422 (L203_100206)
 Complex C
  U2 snRNP components
    91084422 (L203_100206)
DNA replication proteins [BR:cdep03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     91084422 (L203_100206)
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 91084422
NCBI-ProteinID: XP_066065765
UniProt: A0AAJ8JMM2
LinkDB
Position
1:complement(join(499531..499546,499597..499629,499775..499863,499955..500074,500146..500160))
AA seq 90 aa
MSAIAPVNPKPFLQELTGKVVYARLKWGLEYKGFLVSTDGYMNLQLANAEEIENGKSNGA
LGEVFIRCNNVLYIRIRTDRRGLIELNSSS
NT seq 273 nt   +upstreamnt  +downstreamnt
atgtctgccatcgctcctgtcaacccaaagccttttcttcaagaactgactggcaaagtt
gtctatgcccgattaaagtggggtctggagtacaagggattcctagtatctacagatgga
tacatgaacttacagcttgccaatgccgaagagattgagaatggcaaatcaaatggtgcc
ctgggagaggtctttattaggtgcaacaatgtcttatacataaggattaggacagatcgt
agaggattgattgaacttaattcctcttcctga

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