Cryptococcus depauperatus: 91084756
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Entry
91084756 CDS
T10265
Symbol
L203_100540
Name
(RefSeq) uncharacterized protein
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
cdep Cryptococcus depauperatus
Pathway
cdep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
91084756 (L203_100540)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cdep03041
]
91084756 (L203_100540)
Enzymes [BR:
cdep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
91084756 (L203_100540)
Spliceosome [BR:
cdep03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
91084756 (L203_100540)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
WHD_HA2
HA2_C
DEAD
AAA_22
AAA_19
AAA_30
nSTAND_NTPase5
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
91084756
NCBI-ProteinID:
XP_066066095
UniProt:
A0AAJ8JNA3
LinkDB
All DBs
Position
1:join(1448702..1448740,1448788..1448836,1448885..1450021,1450076..1450521,1450569..1450964,1451012..1451521,1451571..1451906,1451966..1452152,1452210..1452301)
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AA seq
1063 aa
AA seq
DB search
MDLDNFISDNVVTILGSSDSATVDYVRSLAISSKTPGDLYNSLLATGMASNPETQAFAVK
VHSLIPRKTKPKTSKTDKADSAPKFTLLLEEDQPQSSNKAKKKKKDKGRDNEPKDVGVKK
ARSARKRETEGNWESDEEEKEAKRTRIQSPLRNELHDNEESRTPEETEEERLERERLEDL
RARDEFADRMKQKDLDRTKKIVEDRSSRALGGVEVTKRVDLMNEPAAREAMIADLRNRSR
QEYLSKREMQQLDLLKMEIEDEKILFRNQKLSRREEQELERKKELIRLMEERARIDDGTG
GYMLPDDYITEQGRIDQKKKKNALYKRYEEAKPVDGQFITDVDQWEASQQDRTDLKTGAM
DKEVLVEDYDYVFDESQKIKFLEEGKMEGTLTAEAQALLDQVDNLEKQAKSIQETRNSLP
IYEFRDELLEAIAEHQILVVVAETGSGKTTQLPQYLYEAGYCKNGMKVGCTQPRRVAAMS
VASRVAEEMGARLGQEVGYSIRFEDMTSDKTVLKYMTDGMLLREFLTDPELSTYSALVID
EAHERTLSTDILFGLVKDIARFRPDLRLLISSATLNAQKFADFFDQAPIFDVPGRRFPVD
MFYTQQPEANYMHAAVTTILQIHTTQPKGDILLFLTGQDEIEAAEENLKETMYALGDKVP
ELIIAPIYANLPSEMQSKIFEPTPEGARKVVLATNIAETSITIDGVVYVIDPGWVKQNNY
NPKTGMSSLVVEPISRASAQQRAGRAGRVGPGKAFRLYTKWAFKNELLQDTIPEIQRTNL
SMVVLMLKSLGINDVLNFDFLDKPPAETIIRSFELLYALGALNHKGELTRLGRRMAEFPV
DPMLSKAIINSENFKCTHEVLTIISMLQESGSLLYRPKDKRVHADKAHKNFIKPGGDHFT
LLNIFEQWAESNYSQQWCYENFIQFKSLSRVRDIRDQLAQLCDRVEVVIESTPNDLIPVQ
KAMTAGYFYNTARIDKGGGYRTTKNNHSVYVHPSSCLIGMQPPPRFILYYELVLTSKEYM
RQCMPIEGSWLSELAPHYFNKSEIEQLMGSASKVKMPKQVEQP
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggatctcgataatttcataagtgacaatgttgtgacgatccttgggtcctctgacagc
gctactgtcgactatgtacggtcactagcaatatcctcaaagacaccaggagacttgtat
aattccctgttagcgactggaatggcttcgaatcctgaaactcaagcatttgcagtcaaa
gtacattcactcattccaagaaagaccaaacccaagacttccaaaacagataaggcggat
tctgccccgaaatttacattgttgcttgaagaagaccaaccgcagagctccaacaaggcg
aaaaagaagaaaaaggataagggtcgagataatgagcccaaagatgttggcgtcaagaaa
gcaaggagtgcaagaaagagagaaactgagggtaattgggaatctgacgaagaggagaag
gaggcaaaacgaacccggatacagtcgcccttgaggaatgaactgcacgataatgaagaa
tcacggacgccagaagaaactgaggaggagcggttagaacgtgaaagattagaagattta
cgagcaagagatgaatttgcagaccgaatgaagcaaaaagatttggatcgtaccaaaaaa
attgtggaagatcgttcatcacgagcactcgggggtgttgaagtgaccaaacgagtcgac
ctcatgaatgaaccagccgctagggaggcaatgatagcagatctacgaaatcgctctcga
caggaatatctttcaaaaagggagatgcaacagcttgatctcttgaaaatggaaatagag
gatgagaaaattctgttccgcaaccaaaaactctcaagaagagaagaacaagagctggaa
agaaagaaggagctaatccgattgatggaggagcgtgcacgaatagacgatgggacaggc
ggttatatgcttcccgatgattatattactgaacaaggccgaatcgatcaaaaaaaaaag
aaaaatgcgctgtataaacgatacgaagaagctaagcccgtggatggtcaatttatcacg
gatgtcgatcagtgggaggcgtctcagcaggataggacagacttgaagacaggggccatg
gataaagaagtgctggtagaagactatgattacgtctttgatgagtctcaaaagataaaa
ttcttggaagagggcaagatggaaggtactttaacagcagaggctcaagctttactggat
caagtcgataatttagaaaagcaagctaaatcaatacaagaaactcgcaactctctcccc
atttatgaatttcgagatgaacttcttgaagctattgcagaacatcaaatacttgtcgtt
gttgctgaaacagggtctggaaagaccactcagcttcctcaatatctatatgaagctgga
tattgcaagaacgggatgaaggtggggtgcacgcagcctcgtcgtgtggcggcaatgagt
gtcgcctctcgtgtcgcagaagaaatgggtgcaaggttaggacaagaagttggctactcc
attcgatttgaagacatgacaagtgataaaacggtgctaaagtatatgacggacggtatg
ctgttacgtgaattcttaacagacccagaattatcgacctattcggcgttggtcatcgat
gaagcccatgagagaacgctaagtacggatatattatttggtttagtcaaggacatagct
cgttttcggccagacttgagattgttgatatcgagtgcaacgttaaatgcccaaaagttt
gctgatttcttcgatcaagcgccaatctttgatgtacccggtcgtcgcttccctgtggac
atgttttacactcagcaacctgaagcaaactacatgcatgcggcggtcactaccatcctc
caaattcatacaacccagccaaaaggggatatactcctttttttgacaggccaagatgaa
attgaagctgcagaagagaatttgaaagagaccatgtacgcactgggcgacaaggtgcca
gaattgataattgcacccatatatgccaacttacctagtgaaatgcagagcaaaatcttt
gagccgacaccagaaggcgctcgaaaggttgttcttgccacaaacattgccgaaacttcc
atcactatcgacggcgtggtatacgtcattgaccctggatgggtaaaacagaacaactat
aatcccaagaccggcatgtcttccctagttgttgagccaatctcccgtgcatctgctcaa
caacgcgccggtcgtgcaggtcgagttggtcctggcaaagctttccgtctatataccaaa
tgggcattcaaaaacgagttgctgcaagataccattcctgagatacaacggacaaacctt
tctatggttgtcctcatgcttaaatccctaggtatcaacgatgttctcaacttcgatttt
cttgacaagccaccggcagagacaattatcaggtcttttgaattgttatacgccctagga
gccttgaaccacaagggtgaattgacaagattgggaagaagaatggctgagttcccggtg
gatccaatgttatcaaaggccatcattaatagtgaaaacttcaagtgcacacacgaggtt
ctcactattatctctatgcttcaagaatctggttctctcctatatcgtcccaaagataaa
cgggtacatgctgacaaggctcacaaaaattttataaaaccaggtggcgaccattttact
ctgctcaacatttttgaacaatgggcagagagtaattattctcagcagtggtgttatgag
aattttatacaattcaagagtcttagcagagttcgagatattagagatcagttagctcag
ctgtgtgatcgtgtagaggttgtcattgagagcacgcctaatgatttgatacccgttcaa
aaagcaatgactgctggatacttctataatactgcacgcattgataaaggtggcggctac
cgtactaccaagaacaaccactctgtttatgtgcacccttcatcgtgtctgattggcatg
cagcccccgccaaggttcatcttgtattatgaattagtactcacatcaaaagagtatatg
agacagtgtatgccaatcgaagggagctggttgtctgaacttgctcctcattacttcaat
aaatccgaaatcgaacaattgatggggagtgctagtaaagtaaagatgccaaaacaagtt
gagcagccttag
DBGET
integrated database retrieval system
