Cryptococcus depauperatus: 91084992
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Entry
91084992 CDS
T10265
Symbol
L203_100778
Name
(RefSeq) uncharacterized protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
cdep Cryptococcus depauperatus
Pathway
cdep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
91084992 (L203_100778)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdep03019
]
91084992 (L203_100778)
Messenger RNA biogenesis [BR:
cdep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
91084992 (L203_100778)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
91084992 (L203_100778)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_TTP_bind
ARM_Cnot1
CNOT1_HEAT
NOT1_connector
Motif
Other DBs
NCBI-GeneID:
91084992
NCBI-ProteinID:
XP_066066329
UniProt:
A0AAJ8JNR3
LinkDB
All DBs
Position
1:complement(join(2021262..2021290,2021342..2021378,2021438..2021697,2021747..2023304,2023351..2026224,2026339..2026548,2026594..2027133,2027215..2027661))
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AA seq
1984 aa
AA seq
DB search
MSIPPPGLGGGVTRTGPPPGLGGVSLPRSGPPPGFSVGVTASAPASHSPALNLLQSLQAL
QPGGPPRSSGSIPLEDVLFELGENLTQDESTIEGLVRRWWSPWLFEGSPEETRQKITEET
CCVMRGLCDGLSLGRAVDLHGIIKGMSAIDGISWPDVVRSFDVPMTPAAYPSSIPLLVSL
ICLPSQVPVPPMAGLLPANLDSPIWENISSLLSVLNHLTNLPPDAMPIFTMTDAPPPSSY
ARIVDTPTSEQVWSKQARQQARDLQGAGLWNTLGLVQVLVHACALAEMDHRSEREREERA
DIGRRATEILEKAAKLAPELILIAMEKLAKPLPSPVVIQQTRLLAMYLSTKPTDITSSAL
VFHMMWEINPNNLMSVLLEFYGEDENNLGRIFEIGAELKEVLNLEKWLADGIEIKGEEFL
EAIFDFVEHKIRLEFEHQHQPQSENSPLLYTLGPTVYSIFIRVVRNAPDLSRENIARFKN
LRTDILILHPRLLNLRPNSKQEQGFAEAKFSKEVVDKVDDLYQRMYAGQLKLDAVVDELK
KCQKSNESKDRDIFAHALHSLFDEYKFVKSYPIKELTMTGILFGAIIDYRLIKDTPAFVA
TRYVLDACKTSPHEPLYQFGINALSVLRNSLVDFPGLCRSLLEIPALHESHPVLINDIQQ
ALIEREELDLQGGVKLAFPALKLPVLIEEGDDEFQEPETGRKDTIMFHVNQIAPTNYEEK
AKALLEVFENRHSRWFAHYFIDVRVSLEQNRHEIYMQLLQKLNSPLLDRHILWETYRKAR
ELLNSEATINSASERAILKTMAMWLGRITLAQNKPVRMKELSVKDLLIQGYDTKRLIVAI
PFVCNLVASCKDSAVFHPPNPWLTAILRLLAEFYHFGELRLNMKFEIEVLFSKLGVELAS
FEPSNLLRMHVPPPLPQSEVADRLDLELQRATSEMMNGAQRMTDLPGNEAYARIQQLQTE
AAVQAAQDQLARRVDELIAQLPEYLVFNQDYPIFTAPTLKRIVHHSIDRAVRDIITPVIE
RSVTIAGISSRDLIQKDFGTEPDALRMRQAAHMMVQNLAGSLALVTCKEPLRSSMIANVK
SMLEQNGYTDDTMPDAMIAGVVNQNLDVACSVLKKAAMEKAAKDIDVNLAPQYAARKAHQ
NSRSAVPFWDGASFGVAISHSALPDPLKLRPGGLTAQQFRVYEDFGEPARVMSTHPANTA
NGDYLAANYQNLVINDTLEMKAVPSPRHVFSQDVIGSGVEATASPHTISPQISIDRFHEL
AAEIQKAIIQTPASSITALPAEHELRGLIKATIIVANQSVHRENTTLAIAQKVVQLLYRS
TTQLGREVYVYLLQQLCDLSAKVNREVKQWLIYAEDVRKLNVSVTVTLLRAQSIGVQELD
IALSHIALRSYPPEVLDFITQLIRQCSVSDQAWLPRQAFSHSLASLLKAQETSHATPLVD
ALLDELRGPREPSASVDGDQSKTVIDGKLQERLAHYFLEWVRVFSGSKNPEVSFVPYVTY
LQKEGILSGEDVSSAFYRTAIYTAVDLDTAKLNPEEPSKFYGVDALAKLIVLIVKNYGDK
NGTSSSVGRAVYYYNKIITIMSYSLVQRQLAMGDAFNQRPWARFFTSMLSELSTIEYSLP
ETYLGCLKHLANNLGITQPTYAPRFAFGWISIISHRLFMPKLLQSQRDEGWPEYHRCVMW
LLRFLAPFLQSDEMTPSSRSIFKATLRILMLLLHDFPEFLVEFYHTLSTVIPPHCTQMRN
VVLAAFPQSEAPLPDCYKRLDQLVPEMQRFPTVRSDYIGALADGNVKAAIDQYVRTGVPA
LSAIVTELKNRIAVKSMGPGNNTVITWNHTLLHASIFYLGTTAVARGYQQTGIAEFNAKE
PEVAILVNLAHAFDAEGSYYMLNVIADQLRYPSAHTLFFIHFMLFLFRASTQDDVSSAVP
ERIARILLERTIVKRPHPWGLLVAFIELLDNELYGFWKQPFIRGVTVKVVYLQTTDHLVF
NTFT
NT seq
5955 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatccctcctcccggactgggaggcggggtcaccaggacaggtccacctccagga
ctaggaggagtcagccttcctagatctggaccccctcctggcttcagtgtaggtgtaacc
gcgtctgcgcctgcatcccattctcctgcactcaacctcttacaatctttgcaagctttg
cagcccggtggaccaccgcgatcatcaggaagtataccattggaggatgtgttgtttgag
ctgggagagaatttgacccaagatgaaagtactattgaaggattggtaaggcgatggtgg
tcgccgtggttgtttgagggctctcctgaggaaacacgacaaaagattacggaggagacg
tgctgtgttatgcgcggtctatgtgatggtttgtctctgggacgtgccgtggatctacat
gggataatcaaaggaatgtcagccatcgacggtatctcatggcctgatgtcgttagatcg
tttgatgttccgatgactccggcagcatacccttcgtcgataccccttctggtatctctt
atttgtcttccgtctcaagtcccggtgccacccatggcgggcttgttgccagcaaatctt
gattcacccatctgggagaatatttcttctctgctctctgttttaaatcatctcacaaat
ctccctcctgatgcgatgccaatcttcaccatgaccgatgctcctccaccctcttcttat
gctcgtattgttgatacgccgacatctgaacaagtatggagcaaacaggcccgccagcag
gcaagagatctgcaaggcgcaggtttgtggaatactctggggttggtgcaagttttagta
catgcatgcgcattggcagaaatggatcatcgatcagaaagagagcgagaggaaagggca
gatattggaaggcgagcaactgagatattagaaaaagcagcaaaacttgcacccgagttg
atcctaatcgcaatggaaaaacttgctaaaccccttccttcgccggtagtgattcagcaa
acccgtttattggcaatgtacctctctacaaagccaacagatataacttcctccgctttg
gtgtttcatatgatgtgggaaattaacccgaataatctcatgtctgttttgttggaattc
tatggggaagatgagaacaatctgggacgaatctttgagattggggcagaattaaaggaa
gtgctcaacttagaaaaatggctggcggatgggattgaaatcaaaggcgaagagtttctt
gaagccattttcgactttgtggagcacaaaatccgtcttgaatttgagcatcaacaccag
ccacagtctgagaattctcctttactctatactcttggtcccactgtatactctattttc
atccgagtcgtccgcaacgcgcccgatctatctcgcgaaaacattgcccgtttcaaaaac
cttcgtaccgacattctcattcttcacccccgtcttctgaatctccgacccaacagcaaa
caagaacagggttttgctgaagccaaattttccaaagaagtcgttgacaaggttgatgac
ctatatcagcggatgtatgccggtcagctcaagttagacgccgttgttgacgagctcaag
aagtgtcaaaagtcgaatgagtccaaagatcgagatatctttgctcatgcgctgcattcg
ctctttgacgaatacaaatttgttaaatcgtacccaataaaagaattgacaatgactggc
atcttgtttggagctattattgattatcgattgatcaaggataccccagcatttgtggct
acccgatatgtcttggatgcttgcaagacttctccccatgaaccgctttatcaatttggt
atcaacgctcttagcgtgctacgtaactcgcttgttgattttccgggcctttgtagatct
cttctcgaaattcctgcattacatgagtctcatccagtgctcatcaatgatattcagcaa
gctcttattgagagggaagagcttgaccttcaaggaggcgtcaaattagcattccctgcg
cttaaactgcctgtcttgattgaagaaggagatgacgaatttcaagaacctgaaactggt
agaaaggacactatcatgttccatgtcaatcagattgctccaactaattatgaggaaaag
gccaaggctctacttgaggtatttgagaaccggcactctcgttggtttgcccactatttc
atcgatgttcgagtcagtcttgaacaaaaccgacatgagatttatatgcagttgcttcaa
aagctcaactcacctctccttgatcgacacattctttgggagacttatcgaaaggcaagg
gagctactgaattccgaggcaaccatcaattcggcatcagaacgtgcgatacttaaaacc
atggccatgtggttgggtcgaatcacactagcacaaaataagccagtcagaatgaaggaa
ctatcggtaaaggatcttttgattcaaggctatgacactaagcgactgattgtggccatt
cccttcgtgtgcaatttagttgcctcatgcaaggactcggccgtctttcacccccccaat
ccatggcttacagctatcttgagattgttggcagagttttaccactttggcgaacttcgg
ttaaacatgaaattcgaaattgaagtccttttcagcaagctgggtgtggagcttgcttca
tttgagccctctaatcttcttcgaatgcacgttcctcctccacttcctcaatctgaagtt
gctgataggctcgatttggagcttcaacgtgctacttcggagatgatgaatggtgcccaa
cgaatgacagatttgcccggcaatgaggcatatgctcgaatccagcaattgcagactgaa
gcagctgttcaagccgctcaagatcaactggctcgtagggtagatgagcttattgctcaa
cttcctgagtatcttgttttcaatcaagattacccgatattcacggctcctacgctcaag
cgtattgtgcatcattcaattgacagagctgtacgtgatatcattacccctgtcattgag
cgatctgtgacgattgccggcatttcgtcgcgtgatctcatccaaaaggatttcggtacc
gaaccagatgctctcagaatgaggcaagctgcgcacatgatggttcaaaaccttgcgggc
agtttggctttggttacttgcaaggagcctctgcgttctagtatgattgccaatgttaag
tcaatgcttgaacaaaatggctataccgatgatactatgccggatgcgatgatagcaggt
gtggtcaaccagaacttggatgtcgcgtgttcagttttaaagaaggccgcaatggagaag
gctgctaaagatattgatgtcaatctagctcctcagtatgcggctagaaaagctcaccaa
aattcgaggtcggcggtccccttttgggacggtgcgtccttcggtgtagccatttcacat
tctgctcttccggatcccctgaagcttagaccaggcggtctaactgctcaacagttccgg
gtgtatgaagactttggcgagcctgcaagagttatgtcaactcaccctgccaataccgcc
aacggtgattatcttgcagctaattaccagaatcttgtcatcaatgacacccttgagatg
aaggctgttccttccccacgtcatgtcttttctcaagatgttataggaagtggagtggaa
gctactgcttctcctcatactatttcacctcagattagtattgatagattccatgagctt
gcggcggagattcagaaagctattatccaaactcctgcatcaagcattactgcacttccg
gctgaacatgagcttcgtggtctcatcaaggctaccatcatcgttgccaaccagtctgtc
catagagaaaacactaccttggcgattgctcaaaaggttgttcagttactatacagatcc
actactcaacttggacgagaagtctatgtttatttattgcagcagctgtgtgatctatca
gccaaagtcaacagggaagtgaagcagtggttgatctacgctgaggatgtgaggaagctt
aatgtttccgttactgttactcttctacgagctcaatctattggtgtgcaagagcttgac
attgccttgtctcatattgcccttcgttcttacccacctgaggttctcgattttatcacc
cagctcattcgtcaatgctccgtctctgatcaggcatggcttccccggcaagccttttct
catagcttggcatctctgctgaaggctcaagaaaccagccacgcaactcctcttgtggac
gcgttactggacgaacttcgcggcccccgagaaccctcggcttccgttgacggtgaccag
tccaagactgttattgacggcaagctccaggaaagactggcccattacttcttagagtgg
gtcagagtcttcagcggtagcaaaaaccctgaggtttccttcgtaccctatgttacttat
ctgcagaaagaagggatactaagtggtgaagacgtttcctcggccttttataggaccgcc
atctacacggctgttgatctcgacactgctaagctcaatcctgaagaaccttcgaagttt
tacggagttgatgctctagctaaactaatcgttcttattgtgaaaaactatggcgacaag
aacggtactagcagcagtgttggcagagctgtatattattacaataaaatcatcaccatt
atgtcctactctcttgtacaaaggcagcttgctatgggcgatgctttcaatcaacgacct
tgggcaagatttttcactagcatgctgagcgagctatcgacgattgaatacagccttcct
gagacttatcttggctgtttaaagcaccttgccaataatctcggcatcactcagcctact
tatgctcctcgctttgcttttggttggatatctattatctctcaccgtctgtttatgcca
aagctccttcaaagccagagagacgaaggttggccagagtatcatcgatgtgtcatgtgg
ttgcttcgcttccttgcgccatttcttcaatctgatgagatgactccatcttcacggtcc
attttcaaagcaactcttcgtattcttatgcttctcctccatgactttcccgaatttctg
gttgaattttatcacacactatcaacagtcattccaccccattgcactcagatgcgaaat
gtcgttctcgctgctttcccccaatctgaagctccacttcctgattgttacaagcgactt
gatcaactcgtccctgagatgcagcgattccctactgttcgatctgattacatcggtgcc
cttgctgatggcaatgtcaaagctgcaattgatcaatacgttaggactggcgtcccggca
ctctctgcgattgttacggagcttaagaacagaattgctgtaaagagcatgggacctgga
aataataccgtgatcacctggaaccatactttattacatgcctcaatattctatctcggt
accaccgcagttgccagggggtatcagcaaactggtatcgctgagttcaacgcaaaggaa
ccggaggttgcaatcctggtgaatctggcacatgccttcgacgcagagggctcatactac
atgctcaatgttattgccgatcaattgagatacccttcggctcatacccttttcttcatt
catttcatgctgtttctattcagagccagcacccaagatgacgtgtcttccgctgttcct
gagcggattgctcgtattcttcttgaacgtaccattgtcaagcgcccccatccttggggt
ttactcgttgcttttattgagctactcgacaacgaattgtatggtttctggaaacagcca
tttatcaggggagtcacagtaaaagtagtatatctgcaaacaacggatcatctagtgttc
aataccttcacttag
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