Cryptococcus depauperatus: 91084998
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Entry
91084998 CDS
T10265
Symbol
L203_100784
Name
(RefSeq) uncharacterized protein
KO
K12876
RNA-binding protein 8A
Organism
cdep Cryptococcus depauperatus
Pathway
cdep03013
Nucleocytoplasmic transport
cdep03015
mRNA surveillance pathway
cdep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
91084998 (L203_100784)
09122 Translation
03013 Nucleocytoplasmic transport
91084998 (L203_100784)
03015 mRNA surveillance pathway
91084998 (L203_100784)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdep03019
]
91084998 (L203_100784)
03041 Spliceosome [BR:
cdep03041
]
91084998 (L203_100784)
Messenger RNA biogenesis [BR:
cdep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
91084998 (L203_100784)
Spliceosome [BR:
cdep03041
]
Complex C
Other components
EJC/TREX
91084998 (L203_100784)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_3
RRM_5
RRM_Nup35
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
91084998
NCBI-ProteinID:
XP_066066335
UniProt:
A0A1E3J020
LinkDB
All DBs
Position
1:complement(join(2041379..2041460,2041539..2041633,2041727..2041863,2041936..2041990))
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AA seq
122 aa
AA seq
DB search
MADIDMNERNGNHSWAAPSIEGWVIIVTGLNEEATEEDLSDFFADFGDVTNINMPLNRRT
GYVMGYALVEYKKKEEAEKAIAETDGTTFLEQTIHTNFAFSEAPQSNDRRRGDRARETSP
RR
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
atggccgacatcgacatgaatgagagaaacgggaaccattcttgggctgctccatccatt
gaaggatgggttatcattgtgacgggtttaaatgaagaagcgacagaagaagatctctcg
gatttctttgcggattttggagatgtgacgaatatcaacatgcctctcaacagacggacg
ggttatgtcatgggatacgcattggtagagtacaagaagaaggaagaagcagagaaagcc
atcgcagagacagatgggacaacttttcttgagcagaccattcacaccaactttgctttc
tccgaggctcctcaaagtaacgatcgacgaagaggagatagagctagagagacatcacca
aggagatga
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