KEGG   Cryptococcus depauperatus: 91085169
Entry
91085169          CDS       T10265                                 
Symbol
L203_100955
Name
(RefSeq) uncharacterized protein
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
cdep  Cryptococcus depauperatus
Pathway
cdep03018  RNA degradation
cdep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cdep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    91085169 (L203_100955)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    91085169 (L203_100955)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cdep03019]
    91085169 (L203_100955)
   03041 Spliceosome [BR:cdep03041]
    91085169 (L203_100955)
Messenger RNA biogenesis [BR:cdep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     91085169 (L203_100955)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     91085169 (L203_100955)
Spliceosome [BR:cdep03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    91085169 (L203_100955)
SSDB
Motif
Pfam: LSM Yop-YscD_cpl
Other DBs
NCBI-GeneID: 91085169
NCBI-ProteinID: XP_066066504
LinkDB
Position
1:join(2456459..2456486,2456534..2456574,2456627..2456742,2456791..2456881)
AA seq 91 aa
MASIESYVDQTVQVILQDGRIIVGYDQRTNLILADSVEREYSAEQGVEMVPLGLYVIKGD
NVALVAEIDEEKDSTINYSEILAEPLPEIRY
NT seq 276 nt   +upstreamnt  +downstreamnt
atggcttctatagaaagctatgttgaccaaactgtccaagtcattctccaggacggcagg
attatagtcggttacgaccaacgtacaaaccttattcttgcagactctgtcgagcgcgag
tactctgccgagcaaggcgtggaaatggttccactgggattgtatgtgatcaagggcgac
aatgtggcattggtagcagagattgatgaagagaaggacagcaccatcaactacagcgag
attctcgctgagccattaccagagatacgctattga

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