Cryptococcus depauperatus: 91085351
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Entry
91085351 CDS
T10265
Symbol
L203_101137
Name
(RefSeq) uncharacterized protein
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
cdep Cryptococcus depauperatus
Pathway
cdep03018
RNA degradation
cdep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
91085351 (L203_101137)
09123 Folding, sorting and degradation
03018 RNA degradation
91085351 (L203_101137)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdep03019
]
91085351 (L203_101137)
03041 Spliceosome [BR:
cdep03041
]
91085351 (L203_101137)
Messenger RNA biogenesis [BR:
cdep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
91085351 (L203_101137)
mRNA degradation factors
5'-3' decay
Lsm complex
91085351 (L203_101137)
Spliceosome [BR:
cdep03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
91085351 (L203_101137)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
91085351
NCBI-ProteinID:
XP_066066679
UniProt:
A0A1E3IKE5
LinkDB
All DBs
Position
1:complement(join(2892229..2892257,2892310..2892393,2892462..2892533,2892665..2892791,2892930..2892941))
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AA seq
107 aa
AA seq
DB search
MSGRGGRGGSRGGQGNQGDRKKRESILNLAQLVDKSIRVKFMGGREVTGILKGYDQLMNL
VMDDVVEEYEDERPTRNLGLVVLRGPNIVLVSPTDGSSEIENPFQQS
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaagaggcggccgaggcggttctcgaggcggacaaggcaaccaaggagatcgt
aaaaagcgagagtccatcctcaatctagcccagttagtagacaagagcatcagagtcaaa
ttcatgggaggtcgcgaagtcactggcatattgaagggttatgaccagctcatgaacctc
gtcatggatgatgttgtagaagagtatgaggatgaacgaccaacacgaaatcttggttta
gtcgttctccgtggccccaacattgtactcgtgagccctacggatggctcatcagaaatt
gagaacccctttcaacagtcataa
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