Cryptococcus depauperatus: 91085514
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Entry
91085514 CDS
T10265
Symbol
L203_101301
Name
(RefSeq) uncharacterized protein
KO
K18748
protein SSD1
Organism
cdep Cryptococcus depauperatus
Brite
Messenger RNA biogenesis [BR:
cdep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
91085514 (L203_101301)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
91085514
NCBI-ProteinID:
XP_066066840
UniProt:
A0AAJ8LXR2
LinkDB
All DBs
Position
2:join(171451..173229,173277..174667,174717..174869,174913..175076,175129..175339,175399..175672,175724..176053,176110..176173,176224..176441,176493..176578,176625..176956,177011..177030)
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AA seq
1673 aa
AA seq
DB search
MMANPITEPTPVQPSQSPSTLAPPPVYPSRPGSADSFKSNSSRRNQKGGSSNMSRSNSNT
SSRGHSDKGKGDKKKQSGPTTTISGGVSLGIGADQSNKRGQGKGKGNQGKPEEKQDNAAE
DDKSQQKKNQGKGKRSGPVKRPNPINTSSSKPNSNSQNPETKTFEDVGTSQSAPGPNSIH
ATISAPRTAIEAAVEAATKKHKAQSGGDALASLQKMISDLKTLPPTSGPGSGSSSGSRSA
SVARDRESQSIASARAEPVAIPSANSHKALKADAPTFTPSFQSSFSPVASTSGLSTSPSN
QISSQVLPHPRTTSIGSAGGHPRRTSSSSVASPGFVPPFNPSPVQSFGNPLPPFYQNSLS
SHPEADNENLSSLAFAHQANLQYQQQQLIAAQQQQYQYIQLLQAQLAATQLAQHQAQQAA
HQSQQQMGSFIAPRFQALAAQRAAAQQQQQAAQLAQAQQIFELQQVQLLQQQEEARAAVF
AAENVRSQQQPVFDEDESPESLSGSLGPTGRPQLAPSFTFGGKPKQSHTHQESISEKTSS
ARESLSPSQSHASPIIVNRSEGIGGAAATGLAGLAARAHKRTGSEMSSALQQQLVIQQEI
EALQAKQKALMQQELSNHESPLAQLNTTLSSKVTPSQTLSRHRRVQSSMPSSSAPTESIL
ERDHENHSNTLGDMLPPPIPAGHSRRHSMNIFNKAAGSGAGFGMANDTTEGAAAPPGHRR
SNSRGGMDSGNWRLGASASNTQSQSQVADLAAAQAQLQSLAQFRAAAGGGHTKMASFSFP
NMLPNLLAATTLQTPAGQSLWQQQQAFQMQLQQTSQGPQRKSLFAPYLPQASLPPLLQAG
KLVVGVLRVNKKNRSDAYVATDVLEADIYICGSKDRNRALEGDIVAVELLDVDEVWTAKK
DKEEKKRKKEENAAYDLRPSAAKKFEKKKDDVEVEGQGLTLFDDEEVNDDTKPTYAGHVV
AVVERMPGQLFSGQLGVLRPSSAATKEKQELERREREGDRAKKEEPEARPKIVWFKPTDK
RVPLIAIPTEQAPVDFIENPDAYGNKLFVATIKRWPITSLHPFGTLVEELGPIGDSEVET
SALLKDCNFPTEEFSEMTMKCLPPLPWSIPERELEVRLDYRGQRVFTIDPPKAKDLDDAL
SLERNQDGTCIVGVHIADVSHFVKTNTQLDREARKRATSVYLVQRAVPMFPPQLSEDLCS
LLPGVERLAFSAFFTLDEDGNILSKKFTKTIVKSCAKLNYADALKVVDGGSLPRSKTAGT
QPASAIEEDIKRLHSIASLIRKRRVENDSMLSNSLKVSFELDAQGRPVDVETYKHDAVSA
IVEEFMILTNQAAAHIIAAGLPEQALLRRHEAPTERRLDSFVRRASKLGFEVDPASAGTL
QKSFDKVQNEDEALCLELLRKKAMQSARYFCTGMLDIAKYSHWGLNNALYTHFTSPIGRY
ADVLVHRMLDTCLSSPNPNEVKFLMDRDQVAKAAQQCNMKKQSAELAEEQSIHLFLCMLI
RDLTERYGPVIREARVTNVLETAFDVIVPEFGVEKRVHVDKMPVETAVYDEHNDVLSLYW
TKKDVLTHLSETTDDARLLKIKSLGERRALGHSTSRTADESALFEGNTSGVVSKQYEKSA
HPSPLKFEGLRSAEGGHKIQDVRELMSLPVIITSDMSKSPPVLVVYACNPYAK
NT seq
5022 nt
NT seq
+upstream
nt +downstream
nt
atgatggccaaccctataaccgaaccaacacctgtacaaccttctcaatctccgtctacg
cttgcgcctccgcctgtttatccttctcgtcccggatcagcagactcgtttaaaagtaat
tcttcccggcgcaatcagaagggcggttcttcaaacatgtctcgaagcaactccaataca
tcatctcgtggccattctgataagggaaaaggagacaagaagaaacaaagcggtccaaca
acaacgattagcggaggtgtgagtttgggtatcggtgctgaccaatcaaataaaagaggt
caaggaaagggaaagggtaaccaaggcaaaccggaggagaagcaggataatgccgctgaa
gatgacaaatctcaacagaagaagaatcaaggcaaagggaagaggtcaggccctgtcaag
cgaccaaatcctatcaacactagttcttccaagccaaactcaaactctcaaaatcctgag
acaaaaacatttgaagacgtagggacttcgcaatctgcacctggaccaaattctatccac
gccacaatttctgctccacgtacagcaattgaagctgccgtagaggcagccactaagaag
cacaaggctcagtctggtggcgatgcgttggcgagcttgcaaaagatgatttctgacctc
aagactttaccaccaacctctggacctggttctggtagctcttctggctcgcgatcagct
agtgtggctcgcgatcgcgaatcgcaatcaattgcatcagctagagcggagccagtcgct
atccccagcgctaattcccacaaggcattgaaagctgatgccccgacgtttactccttct
ttccaaagctcattctcccctgttgcgtcaacgtctggcttatcaacatcgccaagtaac
caaatttctagtcaagttctaccacatccgcgaactacatctataggcagcgcaggtggt
catcctcgtcggacttcttctagctcggtggcaagtccaggatttgttccccctttcaac
ccgtctcctgttcaatcgttcggtaacccccttcctccgttctatcaaaattctctgtct
agtcaccctgaagccgacaatgaaaacttatcgtcattggcttttgcccatcaagccaat
ttgcaatatcagcaacaacaactcattgctgctcaacaacagcagtaccaatacattcaa
cttctgcaagcccaactggcagcgacacaacttgctcaacatcaagcacagcaagctgct
catcagagccaacagcaaatgggaagctttattgctcctcgtttccaagcacttgccgct
caaagagctgctgctcaacaacagcaacaagcagctcaacttgcacaagctcagcaaata
tttgaactccagcaggtacagcttcttcagcagcaagaggaggctcgagcggctgtgttt
gctgcggaaaatgttcgttctcaacagcagcctgtctttgatgaagacgaatctcctgaa
tctctttctggttcgctcggacctactgggcgacctcaacttgcgccttccttcactttt
ggtggaaaacctaagcaatcacatacacatcaagaaagtatctctgagaaaacatcgtct
gccagagaatcgttgtcaccctctcagtctcacgcttcgccaatcattgtaaatagaagc
gaaggtattggaggagccgcagctacaggacttgccggtctggcagcaagagcacacaag
agaacaggcagtgagatgtcttctgccttacagcaacaacttgtcattcaacaagaaatt
gaggctctgcaagcaaaacaaaaagcgctcatgcaacaagagctctctaatcacgaaagt
cctcttgctcagcttaacacaactctgtcttcgaaggtaactccgtctcaaaccctctcc
cgtcaccgtcgagtacaatcaagtatgccatcatcttctgctccaaccgaatcaatactt
gagcgtgatcatgaaaatcactcaaatacactaggtgacatgcttccgccgcctattcct
gctggccattctagacgtcatagcatgaatatttttaataaggctgctggttctggcgca
ggatttggtatggccaatgataccacggaaggtgctgctgcaccacctggtcatcggcgc
tctaacagtcgaggtggtatggatagcggcaattggcgtctcggcgcttctgctagtaac
acccaaagtcaaagtcaagtcgcggaccttgcggccgcccaagctcaactccaatccctt
gcccaattccgtgcagctgctggtggagggcatacgaagatggcttcattctcgtttccc
aatatgttgccaaatttactcgctgccacgactctacaaacccctgctgggcagtccctt
tggcaacagcaacaggcattccagatgcagcttcaacagacctctcaaggtccccagcga
aagtctctttttgcaccttatcttcctcaggcttctctcccgcctcttctgcaagcagga
aaactagttgttggtgtgctcagagtaaacaaaaagaacaggtccgatgcctatgtcgct
accgatgttctcgaagccgatatttacatttgtggttctaaggataggaatcgagctctt
gaaggcgatattgtcgcagtagagcttttggatgtagatgaagtttggacagcgaaaaag
gacaaagaagagaagaagagaaagaaggaagaaaacgcagcctacgacttgagaccatct
gcggccaagaaattcgaaaagaagaaagatgatgttgaagtagaaggccaagggctgact
ctcttcgatgatgaggaggtcaacgatgataccaagcctacttacgccggccatgtcgtg
gccgtcgttgagcggatgcctggccaactgttttccggtcagttgggtgtgctccggcca
tcttcagctgctacaaaagaaaaacaagaactggagcgccgcgagcgagagggcgatcgg
gctaagaaggaggagccagaagctagaccaaaaattgtctggtttaagccaactgacaag
cgtgtacctcttatcgctataccaactgagcaggcacccgtagactttatagaaaacccc
gatgcctatgggaacaagctgtttgttgctaccatcaagcgatggcctattacctcttta
catcctttcggtactcttgtagaagaacttggccctattggagactctgaggtggaaact
agcgcgttgctcaaagactgtaatttcccgaccgaagaattttcggaaatgaccatgaag
tgtttaccgccattgccatggagcatccctgaacgcgagcttgaagtcagattagattat
agaggccagcgagtgttcactattgatccgcccaaggcgaaggatttggacgatgcttta
tccctcgaaaggaatcaagacggaacttgtatcgtcggtgtgcatattgcggatgtctcc
cactttgtcaaaaccaacactcaactcgatcgggaggctcgtaagcgcgctaccagtgta
tatctcgtacagcgagcagtgccaatgttccctcctcagctttcggaagatttgtgcagt
cttctccctggcgtcgaaagactggcattttctgccttctttactttggatgaagatggc
aatatactctcgaagaagtttacaaagaccatcgtcaagtcctgtgccaagctgaattac
gcagatgctctcaaagtggttgatggcggatctttgccaagatccaagactgcaggcact
cagcctgcctctgcaatcgaggaagacatcaagcgcttgcattctatagctagcctaatc
aggaagcgacgcgttgaaaatgattcaatgctcagcaattcactcaaggtgtcatttgaa
ctagacgcccaaggtcgaccagttgatgtggaaacttacaaacatgatgcagtttctgct
attgttgaagagtttatgattctcactaatcaagctgccgcccatatcattgctgccggt
ttacctgagcaagctcttcttcgtcgacatgaagcccctacagagcgtaggctagattct
tttgtgaggcgcgcatccaagcttggttttgaggtggacccagctagtgcgggaactctt
caaaaatcgtttgataaagttcaaaatgaggacgaggctctttgtctcgaactattaagg
aaaaaggctatgcaaagtgcccggtacttctgcacaggcatgttggatattgcaaaatac
tcccattggggtctcaacaatgcgctgtacacccactttacttcccctattggtcgatac
gccgatgtcctcgtgcatcgcatgctcgacacctgcttgtcaagccctaatcctaatgag
gtcaagttcctgatggaccgagatcaggttgccaaggccgctcaacaatgcaatatgaag
aagcagagtgccgagttagcagaagagcaatccatacatctttttctttgtatgcttatt
cgcgatctaactgaacgttatggtcctgttattcgcgaagccagagtgacgaatgtactt
gaaacggcttttgatgttatagttcccgaattcggtgtagagaaaagggtccatgtagac
aagatgcctgtggaaactgccgtctatgatgagcacaacgatgttctttctctgtattgg
actaagaaagatgttcttacacatctctcggaaaccactgatgatgcccgcctcctcaag
atcaaatcactcggcgagcggcgcgcacttggccactctacctctcgaacagccgatgaa
tctgctttgttcgagggtaacacctcaggagtcgtctctaagcagtatgagaaatctgcc
cacccatcgcccctcaaatttgaaggcctcaggagcgccgagggaggacacaaaattcag
gatgtaagagagctgatgagcttaccagtcatcatcacaagtgatatgagcaaaagccct
cctgtgctagtcgtttatgcttgcaatccatacgcaaagtag
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integrated database retrieval system
