Cryptococcus depauperatus: 91085734
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Entry
91085734 CDS
T10265
Symbol
L203_101521
Name
(RefSeq) uncharacterized protein
KO
K12881
THO complex subunit 4
Organism
cdep Cryptococcus depauperatus
Pathway
cdep03013
Nucleocytoplasmic transport
cdep03015
mRNA surveillance pathway
cdep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
91085734 (L203_101521)
09122 Translation
03013 Nucleocytoplasmic transport
91085734 (L203_101521)
03015 mRNA surveillance pathway
91085734 (L203_101521)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdep03019
]
91085734 (L203_101521)
03041 Spliceosome [BR:
cdep03041
]
91085734 (L203_101521)
Messenger RNA biogenesis [BR:
cdep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
91085734 (L203_101521)
TREX complex
91085734 (L203_101521)
Spliceosome [BR:
cdep03041
]
Complex C
Other components
EJC/TREX
91085734 (L203_101521)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
91085734 (L203_101521)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
91085734
NCBI-ProteinID:
XP_066067058
UniProt:
A0AAJ8JQ46
LinkDB
All DBs
Position
2:join(709263..709301,709374..709571,709624..709757,709802..709815,710038..710204,710257..710283)
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AA seq
192 aa
AA seq
DB search
MASKMDIDRSLDEIIASKPKPNRSKQGGARRGGAASGARARYTSTVPKGTSVIQTPLGAE
VYKIIISNLPGDVTEPAVRDLMQSTVGPVKTVRMSFTSTGKSTGVATVVFKNRGDARKAH
ASCEIIDNQRPMKVELIVDPNQSLAGRVAPPPSQPQRRRAQQAAKPRNPRPVKKTAEQLD
AEMAEYKQTSTA
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atggcctctaagatggacattgaccgatctctcgatgagatcattgcttctaagcccaag
cctaatcgatccaagcaaggtggtgcacgacgaggaggagccgcctctggtgctcgagct
cgttacacgtcgactgttccaaaaggaacatctgtcattcagacacccctaggtgccgag
gtctacaagatcatcatcagcaatcttcctggagatgtcactgaaccggccgttcgcgat
ctcatgcaatctactgtgggacctgtgaaaacagtccgaatgtcgtttacttcgaccggc
aagagcactggagttgcaaccgttgtcttcaagaaccgaggagacgctagaaaagctcat
gcatcttgtgaaataatcgacaaccaacgcccgatgaaggtcgaactcattgtcgacccc
aaccaatctctcgccgggcgagttgctcctccgccttcgcagcctcaaaggcgccgtgcc
caacaggctgccaagccacgaaaccctcgacctgtaaagaagaccgccgagcaattggat
gccgagatggctgaatacaagcaaacatccactgcctag
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