Cryptococcus depauperatus: 91085802
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Entry
91085802 CDS
T10265
Symbol
L203_101589
Name
(RefSeq) transcription elongation factor SPT4
KO
K15171
transcription elongation factor SPT4
Organism
cdep Cryptococcus depauperatus
Pathway
cdep03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cdep00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
91085802 (L203_101589)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdep03021
]
91085802 (L203_101589)
03019 Messenger RNA biogenesis [BR:
cdep03019
]
91085802 (L203_101589)
Transcription machinery [BR:
cdep03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
91085802 (L203_101589)
RNA polymerase I system
91085802 (L203_101589)
Messenger RNA biogenesis [BR:
cdep03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
91085802 (L203_101589)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
GrlR
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
91085802
NCBI-ProteinID:
XP_066067125
UniProt:
A0A1E3IT39
LinkDB
All DBs
Position
2:complement(join(870401..870519,870579..870687,870734..870847))
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AA seq
113 aa
AA seq
DB search
MPPKSGKAELRACLVCSILQTTNDFMTQGCPNCEDILEMRGSADRVTECTSLLYDGMIAM
IEPSESWVARWQRIDRKMRGIYAVRVTGRAPPDVIEAIESRGGVYRPRDAVED
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atgccaccaaaaagtgggaaagcagagctcagagcatgcctcgtctgctctatcctgcaa
actacaaacgactttatgacccagggatgccccaactgcgaagatatactcgagatgaga
ggatccgcagatagagtcacagagtgtacgagtctactgtatgacggaatgatcgccatg
attgagccttcagagagctgggtagctagatggcagcggatagatcgaaagatgagaggt
atctatgctgtcagagtgactgggcgtgctccgccagatgtcattgaagcgattgaatcg
aggggtggagtgtatagacctagggatgctgtagaggattag
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