Cryptococcus depauperatus: 91085813
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Entry
91085813 CDS
T10265
Symbol
L203_101600
Name
(RefSeq) uncharacterized protein
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
cdep Cryptococcus depauperatus
Pathway
cdep03030
DNA replication
cdep03410
Base excision repair
cdep03420
Nucleotide excision repair
cdep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cdep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
91085813 (L203_101600)
03410 Base excision repair
91085813 (L203_101600)
03420 Nucleotide excision repair
91085813 (L203_101600)
03430 Mismatch repair
91085813 (L203_101600)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdep03032
]
91085813 (L203_101600)
03400 DNA repair and recombination proteins [BR:
cdep03400
]
91085813 (L203_101600)
Enzymes [BR:
cdep01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
91085813 (L203_101600)
6.5.1.6 DNA ligase (ATP or NAD+)
91085813 (L203_101600)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
91085813 (L203_101600)
DNA replication proteins [BR:
cdep03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
91085813 (L203_101600)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
91085813 (L203_101600)
DNA repair and recombination proteins [BR:
cdep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
91085813 (L203_101600)
NER (nucleotide excision repair)
Other NER factors
91085813 (L203_101600)
MMR (mismatch excision repair)
Other MMR factors
91085813 (L203_101600)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
Motif
Other DBs
NCBI-GeneID:
91085813
NCBI-ProteinID:
XP_066067136
UniProt:
A0AAJ8JQ79
LinkDB
All DBs
Position
2:complement(join(900933..901100,901156..901503,901557..901787,901843..902025,902072..902283,902330..902415,902466..902704,902753..902854,902902..903042,903090..903261,903312..903380,903434..903758,903814..903912,903963..903969))
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AA seq
793 aa
AA seq
DB search
MNEDPITAKSSRKKRIVPDSDDEGEVDPSMKAVKEERNPPQKFLKTSPPRKIASIFERKE
KPPLQSTFKSTKRDPSSNDKNENKANDSRPLAAIFSKPRAGIKDEDEASDEATSQGDDNY
KGEGEEELDDEVEEEQEEEAAVKLASIFTKNHKSVPVADKGWKEGEPVPYAALVSTFGKI
EATTKRLEILEILTQFLLVVAERDTATETKDSMLLRVVYLCINRLCPDYVGIELGIGESL
LVKAIAESTGRAISKIREDLRKEGDLGKVAMNSRNTQMTMFKPKPLTIPYVFQNLLEIAK
AAGNASQNKKVGIINKLLAACQGDEAKFIIRSLEGKLRIGLAEKTMTVALAHAIVLKGLG
DTKLSHDILAVKLEEGAAVVKTVYSELPNYDLVIPALMKGGIEGLRENCKLTPGVPLKPM
LAKPTKAITEILDRFENKEFTCEYKYDGERAQVHLLPDGTISVFSRNSENMSAKYPDLVE
QLPRAIKPSVKSFVIDAEAVAFDLKTKKILPFQDLSRRKRKDVKTEDITVRVHLFAFDLL
YLNDESLLTKPLCERRELMYEHFQAVDSEFAFAKSSDGTSTEEIQAFLEESVKDGCEGLM
VKMLNTESSTYEPSRRSMNWLKLKKDYLSGVSDSLDLVVVGAYHGKGKRTAVYGAFLLAC
YDPDSERYQTICKIGTGFSEELLSQFYELLKPLELEAARGDIEVGGAKPDVWFEPKIVWE
VLAADLSLSPIYAAAHGLVDARGISLRFPRFIRIRDDKDAEDATSAEQVGEFYQLQVTVG
GKKEGNEGEDDFW
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaggacccaattacagcaaagtcctcaagaaagaagagaattgtgccggactcg
gacgatgaaggcgaggtggacccttccatgaaagcagtcaaggaagaaagaaatccgcct
caaaagttcttgaaaacctctccacccaggaaaattgcgtctatttttgagagaaaggaa
aaaccaccattgcaatcaactttcaagtctacaaagagggatccatcgagtaatgacaag
aacgagaataaggcgaatgatagcaggccattggctgcgatctttagtaaacctcgtgct
ggaataaaggatgaagatgaggcatctgatgaagcgacatcgcaaggagacgacaattat
aaaggtgaaggtgaagaagagttggatgatgaagtggaagaagaacaagaagaggaggct
gctgttaagcttgcatccatatttaccaaaaaccacaagtctgttcctgtagcagacaag
ggatggaaagaaggcgaaccggtaccttatgcggctcttgtgtcaacttttgggaaaatt
gaagcgacaaccaagcgtcttgaaatattggaaattcttactcaatttttgcttgttgtg
gctgaaagagatacagccacagagacaaaggattctatgctcttaagagtggtgtatctc
tgtatcaacagattatgcccagactatgttggtatcgagcttggtattggagagtctctt
ttggtgaaagctattgcggaaagtacaggacgcgctatatccaaaatcagagaggacttg
aggaaagaaggcgatctaggaaaagttgcaatgaactcgagaaatacacaaatgacaatg
tttaagcctaaaccacttactatcccttatgtttttcaaaaccttctggagattgccaaa
gcagctggcaatgcttcgcaaaacaaaaaagttggcatcattaataaacttcttgctgca
tgtcaaggcgacgaagctaaatttatcattcgttctttggaaggaaaacttcgcataggc
ttagctgaaaaaacaatgactgtggcattagcacatgccattgtactgaagggtttgggt
gacacaaagctttcgcatgacatactggcagtaaaactggaagagggtgcagcagtggtc
aaaaccgtttacagtgaattgcccaattatgatctagtcattcctgcccttatgaaaggc
ggcatagaaggactgcgtgaaaattgcaagttgactccaggggtacctctcaaacctatg
cttgctaaaccaaccaaagcaatcactgaaatcctcgaccgcttcgagaacaaggaattt
acctgtgaatataagtacgatggtgaacgagctcaagtacatctcttgccagatggaact
atttcagtatttagtagaaattcggagaatatgagtgcaaagtatccagatttggtcgag
caacttccacgagcaataaaacccagcgtcaaatctttcgtgattgatgcagaggctgtc
gcctttgaccttaagacaaaaaagatattgccttttcaggatctcagtcgaagaaagaga
aaagacgtcaagacggaagacatcactgtcagagttcacctgtttgctttcgacttgctg
tatcttaacgatgagagcctcctcaccaaaccactctgcgagcgccgagagctcatgtat
gaacatttccaagctgttgattccgaatttgcctttgccaaatcttctgacggcacaagt
acagaagaaattcaagcttttcttgaagaaagtgtcaaggacgggtgtgagggactgatg
gtcaaaatgctcaacacagaatcatcaacctatgaacctagtcgcagaagtatgaactgg
cttaagttgaagaaggactacttgtctggcgtaagcgattcccttgatctcgttgtcgtc
ggtgcctaccatggtaaaggcaaacgcaccgccgtgtatggagctttccttctcgcttgc
tacgaccctgattcggaacgttaccagaccatctgcaaaattggtactggattctcagaa
gagctcctttcacaattttatgaacttctaaagcctttagaacttgaggccgcaaggggt
gatatagaggtcggaggtgctaaacctgatgtgtggtttgagcccaagattgtttgggaa
gtcttggcagctgacttgagcttaagcccaatctatgctgcagcgcatggcttagtggat
gccagaggcatatctcttcgttttcctcgatttattagaatcagagatgataaggatgca
gaggatgctacttcggctgaacaagttggcgaattctatcaacttcaagtgacggtgggg
ggtaaaaaggagggcaacgagggcgaagacgacttctggtaa
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