Entry |
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Symbol |
L203_101842
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Name |
(RefSeq) transcription elongation factor SPT6
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KO |
K11292 | transcription elongation factor SPT6 |
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Organism |
cdep Cryptococcus depauperatus
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Brite |
KEGG Orthology (KO) [BR:cdep00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:cdep03021]
91086054 (L203_101842)
03036 Chromosome and associated proteins [BR:cdep03036]
91086054 (L203_101842)
Transcription machinery [BR:cdep03021]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
91086054 (L203_101842)
Chromosome and associated proteins [BR:cdep03036]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
91086054 (L203_101842)
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
2:complement(join(1422207..1422290,1422338..1422432,1422485..1422605,1422652..1422791,1422845..1424024,1424071..1424247,1424301..1424900,1424948..1425577,1425627..1426388,1426439..1426565,1426611..1427194))
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AA seq |
1499 aa
MSDLSDSPEGEGDDIRPHGDDHDSSEESEDDPEEYRKIAQGFIVDEEEDEEGEEIEEDRE
TRRRRRKEEKRRRKKDRKLRREREQAELSEDELELIEENRGLREGRAIKRMRRESGSEGS
DGRRAVPTLQDMFRDDEDRMDDDDDDLMDFIEEDEDEEARQGETEEQRRERRRAEKLKRR
EQARIRPDLTGVDRSSWDEIYAVFGDGADYDWALEGEGGMELDEDAEMAKKDLRLEDVFD
PAEIKARRLQDEDRAVASADRPERHQIVNSTLSDNPVFATDALYPPPDLAAKWVTPKISA
RTQYLFCNMLNDGTYPQSNSIDPSGSHMFPRPDLAEEFEKVVSTALNMIFVQHLEVPYLW
HYKRDAFSLLENQGQSSVLFLERDELWQVWALGQRYRAIHERNQQTLQLWEKIKARREGL
VDEYFTNKLLPNVCSINIEAAGEGADWLTFHYSSDVRAMKEEEILDEAAKKLPEKAEDDV
SRQGPILKLVEAYGINVNDVAATFNDTGGVPTPPKNPERKPLELANEFTGTQYVTPEQAL
SAANIILIQNFFKDPAIRQQARDFIEACGQITVNPTDRGMVVIDKYHLYCSFKFLTKKPA
GAFSGSPQFLHMLKAEEEGLINILIDPQDEMIPAFTSTLIRCCHSNDYGEVATAWNEVRA
EVCDTLTKKHLMPMAAKWLREHLRSEAEEYVAERCRAELETRASVRPFATPSMEQGETPS
VLAITNGKGEIRDAVMAVMLDNAGNIRIQTKFDNLKDEEEKSSFIELLEKRKPTVVVIGG
FSVQTARLRDAALDVLREHAIQSLGEDPPVATDYDHEGFQHAMAKYDEKLQEHLIPLTFV
NDATARMYMVSEEAGKEHPNLPSNGKYALGLARYTQNPLNAYCKLGGQIASITFMEHHQK
LISQEKLLYHLERGLVNSVCYMGIEINSCVADPYQRTMLPYIAGLGPRKADSVVYSIQKH
GALINRMAFTDLGLFGPTIFENVAGFLTIESDLRDMMLEVENPQEQPDPLDMTRIHPENY
EFAQKMCQDALDLDVEDVADRHKSEVVQSLMLDEKRGKKLGELNLDDFAFNLQQQGEGNK
RHTLGEIVNELIQYRADRRPPFYTPTDWEIVAMVTGETERTVGRGLKVTATVRKALSARV
FCELDSGLDAILERDYVADEDQPPVSSCGDVFKSRQAVKGVVIMPEPSRFQVRISTRPSD
LRQGVDFIQPFRDEEYNDPERRRAAEAAVAAKKQRRAGKAQRIVNHPNWHVLNAGQAEQF
LASQHRGDCVVRPSSKGPDHIAVTWKVDEDVYQHIDVQEIDKPNEYSLGRILLVGGQYRY
SDLDDLIINHVKAAARRFDDMQMHEKYKPEHELDGFLRNYVQAHPGRSIYGFSIDSDRPG
YLKLCFLNKPTKDGGVIQTWPVQVLPGAYKLGTAVVPGITELCNAFKMQYSVKLAEQNPG
ERQGWVLGHLHWVLEHQRWVPEHLQWAQLAILRCRLLFLALKVRQFQNRLLVLKLRSKS |
NT seq |
4500 nt +upstreamnt +downstreamnt
atgtctgatctttctgattcacctgaaggtgaaggcgatgatattcgaccccatggcgat
gaccatgactcttctgaagaatcagaagatgatccagaggaatacaggaagatcgctcaa
gggtttattgtggatgaagaagaagatgaagagggagaagaaattgaagaagatagggag
acaagacggagaagaaggaaagaagagaaacgtagaaggaagaaagacagaaaactgcgc
agagaaagagaacaagccgaactttcagaagatgaactcgaattaatagaggaaaatcgt
ggtctaagggaaggcagggcgattaagagaatgagaagagaaagcggctctgaagggtcc
gatggcagaagggccgtgccgactttgcaagacatgttcagagatgatgaggacagaatg
gatgacgatgacgatgatttgatggatttcatagaagaggacgaagatgaagaagcaaga
caaggagagacagaggaacaaagacgtgaaagaagaagagcagaaaagctgaagaggcga
gaacaggctagaattaggccggatttgacaggtgtggatcgatcctcttgggacgaaatt
tatgccgtatttggtgatggtgccgactatgattgggccttggaaggcgagggtggtatg
gaacttgatgaggatgcagagatggccaagaaggacttgagactggaagatgtttttgat
cccgctgaaatcaaggctaggagattgcaagatgaagacagagctgtggccagtgcagat
cgccctgaaagacatcaaatcgtcaattccactttgtcggacaatccagtatttgctacc
gatgctctttaccctcccccagatcttgctgcaaaatgggttacgccaaagatctcggcc
cggactcagtacctcttctgcaacatgctcaatgatggtacatatcctcaatctaactct
attgacccatcaggttcacatatgtttcctcgaccggaccttgctgaagagtttgaaaag
gtggtttctactgctctcaatatgatatttgtccagcacttggaagtaccatatttgtgg
cattataaacgggatgccttcagtttattagagaatcaaggtcagagctctgttctcttt
cttgaaagagatgaattatggcaagtttgggccctcggtcagcgataccgcgcaattcat
gagaggaatcaacagacactgcaactctgggaaaagatcaaagcaagaagagagggcctc
gtagacgagtactttaccaataaattgctacctaacgtctgtagcattaatattgaagct
gccggagagggcgcagattggctgacattccattactcttctgatgtcagagcaatgaaa
gaggaagagattctggatgaagctgcaaagaaattgccagaaaaagctgaggacgatgtt
tcacgacaagggccaatcttgaagcttgttgaggcttacggtatcaacgtcaacgacgtc
gctgctacctttaatgatactggcggtgtacctacaccaccgaagaatccagaaaggaag
cctctggaattggctaacgaatttactggaacgcaatatgtaacccctgaacaagcgctg
agtgctgcaaacattattcttatacaaaattttttcaaggacccagctattcgtcaacaa
gcacgagatttcattgaagcttgtggtcagatcactgtcaacccaacagatagaggcatg
gttgtgattgacaaatatcatctctattgtagcttcaagtttcttactaaaaagccggct
ggagctttcagtggcagcccgcagttcctgcatatgcttaaagctgaagaggagggcctg
atcaacattctcattgatcctcaagacgagatgattccagcattcacttcaacgctcata
aggtgttgccattccaacgactatggagaggtagcaacagcatggaacgaagttcgagca
gaagtttgtgataccttgacaaagaagcatctaatgcccatggcggcgaaatggttgagg
gaacatctgagaagcgaagctgaagaatatgtggcagaaagatgtcgagctgagttggaa
acacgggcgtctgttcgaccgttcgctactccatccatggagcaaggtgagaccccttct
gtcctcgccataaccaatggcaaaggcgaaatccgcgatgctgtcatggccgtcatgctc
gacaatgctgggaacattcgcattcaaacgaaatttgacaatctcaaggacgaagaagag
aagtcgtcttttattgagcttttagaaaagcgaaaaccgacagtcgttgtcattggtggc
ttctctgttcaaactgcacggctacgtgatgccgctctcgatgtacttcgagagcacgct
atacaatccttaggcgaggatcctccggttgctactgattacgatcatgaaggattccag
catgcaatggcaaaatatgacgagaaactacaagagcatctgatccccttgacatttgtc
aatgatgccactgcgagaatgtatatggtgtcggaagaagctggaaaagagcatcccaac
cttccctcgaatggcaaatatgctcttggattggcacggtatacacaaaatccgctcaat
gcctactgcaaactaggaggtcagattgcatcgattacattcatggagcatcatcaaaaa
cttatttcccaagagaagctactttatcatcttgagcgcggtcttgtcaactctgtctgt
tatatgggcattgagatcaattcatgtgttgccgatccctaccagaggacaatgttgcca
tacattgctggtctcggtccgagaaaggctgattccgtcgtctatagtattcaaaaacat
ggtgcacttatcaaccgcatggcttttacagaccttggtcttttcggtcctaccattttt
gaaaatgtcgctggcttcctgacaattgagtcggatcttagagacatgatgctagaagtc
gagaaccctcaggagcagcctgatcctctagatatgactcgcattcatccagaaaattat
gagttcgctcaaaaaatgtgtcaagatgcccttgaccttgatgtcgaagatgttgcggat
cgacacaagtccgaagtagtccaaagcttgatgcttgatgaaaagcgtgggaagaaactt
ggggaactcaatttggatgacttcgccttcaacttgcaacaacaaggtgaaggcaataag
cgtcataccctcggagagatcgtcaatgagttaattcaatatcgagccgatcgacggcca
ccattctatacccctacagattgggaaatagtggcaatggtcacaggcgaaacagagagg
actgtgggacgaggtctgaaggtcacagctaccgttcgaaaggcgctttcggcacgagtt
ttttgcgagcttgactcaggtttggatgcaatcttagagcgagactatgtggccgacgaa
gaccaaccaccggtgtcttcttgtggagatgtctttaaatctcgacaagctgtcaagggg
gtagtcatcatgcctgagccttcacgctttcaagtccgcatatctactcgaccgtcggat
cttcgtcaaggagtggactttattcaacccttcagagacgaagaatacaatgaccctgaa
agaagaagggcggctgaagcagcagtcgcggcaaagaagcaacgtagagcaggaaaggcc
caacgtattgtcaaccaccctaattggcatgtgctcaatgcaggtcaagctgagcagttc
cttgccagccagcaccgtggcgactgtgtggtccgcccttcgtcaaaggggcctgatcac
attgctgtgacatggaaggttgacgaggatgtatatcaacacatcgacgtgcaagaaatc
gataaaccaaatgagtattctttaggaagaattctgctcgtaggcggacagtacaggtac
agtgacttggatgacttgattatcaaccatgtcaaagcagctgcaaggaggtttgatgac
atgcaaatgcacgaaaagtacaaaccagagcacgagttagatggtttcctgagaaactac
gtccaagcacatccaggaagaagtatttatggctttagcatcgatagcgatcggcctggc
tacctcaaactttgcttcctcaacaagcctactaaagatggtggtgtcattcaaacatgg
cctgtgcaagtccttcctggagcctacaaacttggtacggctgttgttcctggtatcact
gagctctgcaacgcttttaagatgcaatactctgtcaaacttgctgagcagaatcccgga
gaacgccagggttgggttctcggacacctgcattgggttctcgaacaccagcgatgggtt
ccagaacacctgcaatgggcgcagctcgcaatccttaggtgcagactcctcttcctggct
ttgaaagttcgccaatttcaaaatcgtcttttggtgttaaagctaagaagcaaaagttag |