Cryptococcus depauperatus: 91086390
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Entry
91086390 CDS
T10265
Symbol
L203_102178
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
cdep Cryptococcus depauperatus
Pathway
cdep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
91086390 (L203_102178)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdep03019
]
91086390 (L203_102178)
03041 Spliceosome [BR:
cdep03041
]
91086390 (L203_102178)
Messenger RNA biogenesis [BR:
cdep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
91086390 (L203_102178)
Spliceosome [BR:
cdep03041
]
Complex B
Other components
Prp19-related factors
91086390 (L203_102178)
Complex C
91086390 (L203_102178)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_2
TPR_12
Mad3_BUB1_I
ARM_TT21_C
NRDE-2
Motif
Other DBs
NCBI-GeneID:
91086390
NCBI-ProteinID:
XP_066067703
UniProt:
A0AAJ8JRB2
LinkDB
All DBs
Position
2:complement(join(2250106..2250245,2250299..2251016,2251063..2251141,2251188..2252350,2252402..2253187))
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AA seq
961 aa
AA seq
DB search
MVTESPLSRLSSQFPFTLPIPTPATHSHLTPEKDLHIEEDLSHNPENLRSWLMYIEQVKE
QIAQNESDKGGLRSPEEELLGPLASKNAQDGLQRLVSIYERAIAIFPTTYKLWKGYYLTR
QHYVLGELSNDAKNARAEQSRRGALYKTNVRELLDGAEDAHQWPGGLDPVIGYLEWHALI
ATGERMITCLPTLPVPWLLHLGILLHPKCPAPFKTTYARRTFDRALRTLPPSLHGRIWGL
YLCWAEETGGEAGERVWRRYLKVDPSLTERHITFLLNSTPSRPLAAAKYLLSIARRAQQN
LYSSLEGKSPYQLFVDFIELVEKYADQVGMDEEETLELHKARKDVISQMDGQAEPQEETQ
KAENEKDEPASLDGRLMRIAGPPIPIESKKIFKSSNAQSASKAPVELPYDEDTDPSSPRL
LDVEGIVERDGLKVYQDQAGRLWTGLATYWIKRGEFERAGATFERGLAVVVTIRDFTQIF
DAYAEFSETMISTLMDALADEENLEDEDFDVEETEQELDERMKKFEELMDRRPFLVNEVL
LRRNPNEVVEWGKRIALYGDDDAQVIATYVKALDTIDPRKSTGPFYPLYVNFARYYEEGG
SKDENGESRNEPNLKEARKILERAVKVPFKTVDELAEVWCEWAEMELRNENYDEAIRLMQ
RATTISKNTKINYYDDSLSPQTRLFKSLKLWSYYSDLEESIGTVESTKAVYDKIMELKIA
NAQVIVNYASFLEENKYFEESFKVYERGIELFHFPIAFEIWNIYLSKFVKRYGGKKLERA
RDLFEQALENCPAKFCKPLYLMYAKLEEEHGLAKRAMGIYDRAASIVQASDKFEMYTIYI
AKATANFGLPATRPIFERALEALPDKQTAEMCKQFARMERKLGEIDRARAIYAHASQFCD
PRINGDFWQEWNDFEIDTGSEDTFREMLRIKRAVQASYNTETSFIAAQTAAATKTVEEGE
V
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggttactgaatctcctctttccagactttcctctcagtttccttttactttacctata
cctacgccagccactcactctcatcttactccagaaaaagacttgcatattgaagaagat
ctttcgcataaccccgagaacttgcgatcatggttgatgtatattgaacaggttaaagag
caaatagctcagaacgagtctgacaaaggaggactccgtagcccagaagaagaattgttg
ggtccattggcgtcaaaaaatgcccaggatggtttacagaggcttgtttcgatttatgaa
agagcaattgctatctttccaacgacctacaaattatggaaaggctactaccttaccaga
caacattatgtcctcggtgaactcagtaacgatgcaaagaatgcacgcgcagagcaatca
agacgaggagcactgtacaagaccaacgttcgcgagcttcttgacggcgctgaagatgca
catcaatggccaggaggtctcgacccagttataggatacttggaatggcacgcattgatt
gctaccggagagcgaatgatcacgtgtcttcccactttacctgtcccatggttgttgcac
cttggtatccttctccatccaaaatgtcctgcgcctttcaaaactacttatgcaagaagg
acttttgatagagcactgagaacactacctccgagcttgcatggtagaatctggggccta
tacctttgttgggcagaggagactggcggtgaggcgggtgaaagagtgtggaggagatac
ctcaaagttgatccaagtctgactgaacgacatatcacatttttgcttaattctacccct
tctcggcctctcgcagctgcaaaatatctcctttccattgctcgccgtgctcaacaaaac
ctttactcttctcttgaaggtaaatcgccctatcagctttttgtagattttattgagctg
gtggaaaaatatgcggatcaagttggtatggatgaagaagagactttggagctgcataaa
gcaagaaaggatgtcatatcgcaaatggatggtcaagcagagccccaagaagaaacacaa
aaggcggagaatgagaaggatgaaccagctagtctcgacggccgccttatgcgtatagcg
ggacctcctattccaattgaatccaagaaaatcttcaaatcttcaaatgcacaatctgct
tcaaaagcacctgtggaattaccttatgatgaagatactgacccttccagccctcgttta
ctcgatgtggaaggcattgtcgagcgtgacggcctcaaagtgtatcaagatcaagccggt
agactttggaccggtcttgcgacatattggatcaagcgaggagagtttgagcgagcaggt
gcgacgtttgagaggggtcttgccgttgtagtgacaattcgagattttacacaaatattc
gatgcctatgccgaattttctgagacaatgatttccactttgatggatgcgcttgctgac
gaagaaaatttggaggatgaagatttcgatgtggaagagacggaacaagaattggatgaa
aggatgaaaaagtttgaagagttaatggacagacgcccgttcttagtgaatgaggttctg
ttgaggcgaaacccgaatgaagtggtagagtggggaaagcgaatcgctttgtacggtgac
gatgatgcgcaagttattgccacgtatgtgaaagctctcgataccatagaccctcgcaaa
agcacaggtccgttttatcctttgtatgtcaactttgccaggtattatgaggagggaggt
agcaaggatgagaatggtgaatcaaggaatgaaccgaatttgaaggaagcaagaaaaatc
ttggagagggctgttaaggtgccattcaagacggtagacgaacttgctgaagtatggtgt
gaatgggcggaaatggagttgagaaatgaaaattacgatgaggctattcgattgatgcaa
agagcaactactatatccaagaataccaaaatcaattattatgacgattctctctcgccc
caaacgcgactattcaaatccctaaaactttggtcatattactctgatttggaagagtcc
attgggactgtcgaatcaactaaggcggtttacgacaagattatggaactcaaaattgcc
aatgcccaagttattgtcaattacgcctctttcttagaagagaacaaatattttgaagag
tcattcaaggtatacgaacgagggattgagctattccactttcctattgcctttgaaatt
tggaacatttatctctccaaattcgtaaagagatacggagggaaaaagttggaacgagca
cgagatctctttgaacaggctttggagaattgtcctgccaaattttgcaagcctctttat
ctcatgtatgctaaacttgaggaagagcatggccttgccaagcgtgctatggggatttac
gatcgcgctgcttcaatcgttcaagcttccgacaagtttgagatgtacaccatctacatc
gccaaagcaactgcaaattttgggctaccagccacccgccccattttcgaaagggcatta
gaagctcttccagataagcaaacagcagagatgtgcaaacaatttgcgagaatggagcgc
aagctgggcgaaattgatcgagctagagccatctatgcacacgcaagccagttttgcgat
cctaggattaatggcgacttctggcaagaatggaacgatttcgaaatcgatactgggtca
gaagacacatttcgagaaatgctccgtatcaaacgtgctgtccaagcgtcatataacact
gagacgtctttcattgccgctcagactgcagctgcaacaaaaacagtggaagaaggtgag
gtttag
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integrated database retrieval system
