Cryptococcus depauperatus: 91087183
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Entry
91087183 CDS
T10265
Symbol
L203_102972
Name
(RefSeq) histone deacetylase RPD3
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
cdep Cryptococcus depauperatus
Pathway
cdep03082
ATP-dependent chromatin remodeling
cdep03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cdep00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
91087183 (L203_102972)
03083 Polycomb repressive complex
91087183 (L203_102972)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cdep03036
]
91087183 (L203_102972)
Enzymes [BR:
cdep01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
91087183 (L203_102972)
Chromosome and associated proteins [BR:
cdep03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
91087183 (L203_102972)
HDAC complexes
Sin3A-HDAC complex
91087183 (L203_102972)
BRAF-HDAC complex
91087183 (L203_102972)
REST complex
91087183 (L203_102972)
SHIP complex
91087183 (L203_102972)
MiDAC complex
91087183 (L203_102972)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
91087183 (L203_102972)
Heterochromatin formation proteins
Other heterochromatin formation proteins
91087183 (L203_102972)
Chromatin remodeling factors
NuRD complex
91087183 (L203_102972)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
91087183
NCBI-ProteinID:
XP_066068477
UniProt:
A0A1E3IPW9
LinkDB
All DBs
Position
3:join(1781146..1781181,1781289..1781334,1781450..1781532,1781590..1781707,1781761..1781835,1781906..1782013,1782065..1782095,1782142..1782309,1782370..1782686,1782735..1782980,1783027..1783352)
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AA seq
517 aa
AA seq
DB search
MEPIVGESKRRVCYFFDSDIGNYHYRPGHPMKPTRIRMCHSLVMNYGLYKKMEIFRAKPA
TKREMSQFHTDDYVDFLYRINPDNASQFAKGQVKYNVGDDCPIFDGLFEYCSISAGGSME
GAARLSRDKCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRYHQRVLYIDIDVHH
GDGVEEAFYTTDRVMTCSFHKYGEFFPGTGGVRDNGYGKGKGYAINVPLRDGINDETYKS
IFQPVIKRVIEWYQPGAIVLQCGSDSLSGDRLGSFNLSMRGHAACVRFVKSFSLPLLLLG
GGGYTIKSVSRTWAYETGLAAGVELGRDLPNNEYWEYYGPDYELDVRPSNMTDQNTPEYL
HKVREAVFEVLRDKNAAPSVPLQSVPKLRHDDEDDNEGEDDEDKDIRRPVRLWDKEKQHE
TSLSDSEDEGTGGRRHCKNYKENSVKKSQSKSPADIVIEEAPMIISEEVLKPSSQGVLEE
SSAPVSLLLSPTTDATQPIPLTSIASATTDADVEMEG
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggagcccattgtgggcgaaagcaagcgaagagtgtgttactttttcgactctgatatc
ggcaattaccactatcgcccaggccacccaatgaaaccaacgaggattaggatgtgtcac
tctctggtcatgaactacggcttatataaaaagatggagatatttagggccaaacctgct
accaagcgagagatgtctcaattccatactgacgattacgtcgatttcctttatcggatc
aatcctgataatgcttcgcaatttgccaagggccaggtaaaatacaatgtcggagatgat
tgcccaatctttgacggcctttttgagtattgttctatttctgctggaggatccatggaa
ggagcagctcgtttatcacgagataaatgtgacattgcggtcaactgggccggaggttta
caccatgcaaagaagtctgaggcgagcggattttgttatgtcaacgatattgtcttgggt
attttggaactcttgagatatcaccaaagagtgttgtatattgatattgatgttcaccat
ggtgacggtgttgaagaagcattttacaccacagatcgtgtgatgacatgcagttttcac
aaatatggagaattcttccctggaactggcggggttagagacaatggctatgggaagggc
aaaggctacgctatcaacgttcctcttcgagatggtatcaacgatgaaacctacaagagc
atatttcaaccagtcatcaagcgtgtcattgaatggtatcagcctggcgctatcgttctt
caatgtggctccgattctctttctggcgaccgtttgggttctttcaacctttctatgcgc
ggacatgctgcttgtgttcgctttgtcaaatctttcagtctccctctacttcttctgggc
ggcggaggatataccatcaaatctgtttcaagaacctgggcatatgagactggtttagca
gcaggtgtagagcttggtcgagatttgccaaataatgagtattgggaatactacggccca
gattatgaacttgatgttcggccatctaatatgacggaccaaaatactccagaatatctt
cacaaagttagagaagcggtgtttgaagttttacgtgataagaatgcggcccctagtgta
cctctacaatctgttccaaaattaagacatgatgatgaggatgataacgaaggggaggat
gatgaagataaagacattcgtcgaccagtacgtctctgggataaggaaaaacaacacgaa
acgtcgctttcagattccgaggatgaaggcactggcggtcgacggcattgcaaaaattac
aaagagaattctgtcaagaaatctcagtcaaaatctcccgctgatattgtcattgaagaa
gctccaatgattataagcgaggaagttttgaagccttcctctcaaggcgtcttggaggag
tcttcggcgcctgtatctttactattatcgccaactaccgatgctacgcagcccataccc
ctaacctcaatcgcatcagcgacgacagatgctgacgttgaaatggaaggttaa
DBGET
integrated database retrieval system
