Cryptococcus depauperatus: 91087652
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Entry
91087652 CDS
T10265
Symbol
L203_103441
Name
(RefSeq) uncharacterized protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
cdep Cryptococcus depauperatus
Pathway
cdep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cdep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
91087652 (L203_103441)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdep03021
]
91087652 (L203_103441)
03019 Messenger RNA biogenesis [BR:
cdep03019
]
91087652 (L203_103441)
Transcription machinery [BR:
cdep03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
91087652 (L203_103441)
Messenger RNA biogenesis [BR:
cdep03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
91087652 (L203_103441)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pcf11_C
CID
zf_PCFS4
DUF7340
zf_UBZ
zf-C2H2_4
zf-C2H2_11
GlnD_UR_UTase
zf-Tbcl_FmdE
HVO_2901
Motif
Other DBs
NCBI-GeneID:
91087652
NCBI-ProteinID:
XP_066068940
UniProt:
A0A1E3IIC6
LinkDB
All DBs
Position
4:join(445700..445936,446003..446928,446973..447147,447200..447439,447487..447699)
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AA seq
596 aa
AA seq
DB search
MAYHVYPPFQPTPFYPPAQAPPYPADSFRRQYADRLRTLTFNSRPIIQELSLMAMAARDR
NDWDAMQAVVEEIELAVLRAHPAQKLPLLYLLDSISKNVGPPYTTHLLPSIMPRLYIKTY
RDVDGVTKTKMEEMIGLWRTSGHDGHDLYGSQVREQVEKELFGSSGLQGTKTPNRQQVQV
LVTAALENKRREIAINPGDVVLSRQLNALMGIGDLLNKSAVQPQELTMIMEQVQAMATSV
SSASTLTLPPATPVWNGPSSVGHHAPANLPPFPPKMPANGGDSSAPVGIPPFPTPPMAVS
SPTVVKFSTPVPPIPSTTPVSAPAASSNPNIPVDVARILQTLNKSGIGSQTPTHEVNPET
LQPKTGLEAYEELILNLDIKLQSIDLNASHHLWFDHLPHRCQQCGMRFTSADAAFDAHMD
WHFRRNRKERESLGRGAHRKWLPRIEEWIHDTLLATHTDTLSPTRNHKATVSAERLAQLR
QKWVKVPENLKEKASVCPVCKEAFKAEWSEAEEEWIWKNALNINGNYYHATCRAEQTSAL
KRLRAADPNRRTSTSGSPRTTPSNDLPKMENQKRKAGEGEQDDESAKRVKAENYNE
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggcttatcacgtgtatccaccctttcagccgacacccttttacccgccagctcaagca
ccaccatatcctgctgattcctttcgaagacagtatgcagataggttgaggacgctcacg
tttaattccaggccaatcatccaggaattgtcattgatggcaatggcagcacgggatcgc
aacgactgggatgcgatgcaagcagtggtcgaagaaatcgaattggcagttttgcgggcg
catccagcccagaaacttccattgctctaccttctcgactcgatatccaagaatgtcggt
ccaccttacacgacacacctcttgccgtccatcatgcctcggctgtacatcaagacgtat
cgggatgtcgacggggtgacgaagacaaagatggaggagatgattggcctgtggcgcacc
agtggacatgatgggcacgatctctacggctctcaggtcagagaacaagtcgagaaggaa
ttgtttggctcatctggcttgcaaggcacaaagacgccgaatcgacagcaagtccaagtg
cttgtgaccgccgcattggagaacaagcggcgagaaattgccataaatccgggtgacgtt
gttttgtctcggcagttgaatgcattgatgggtatcggggatttgctcaataagtcggca
gtacaaccccaggagttgacaatgatcatggagcaagttcaggccatggctacctctgtt
tcttccgcctctacattgactcttccgcctgctacgccagtctggaacgggccgtcttcc
gttggccatcatgcgcctgccaatctcccgccatttccgccaaagatgcccgccaatggt
ggcgattcttctgcacctgtagggataccgccgtttccaacaccacccatggctgtatca
agcccgactgtggtaaagtttagcacacccgttcctcctattccatctacgacgcctgtc
tcggcaccagctgcttcatctaatcctaacattcctgttgacgtagccagaatcttgcag
actctgaacaaatcaggtattgggagccaaacaccgacgcatgaagtgaatcctgaaacg
cttcaacccaagactgggttggaagcttacgaagagttgatcctgaatctggatatcaag
ttacagagtatagatttgaatgcatcgcatcatctttggtttgaccatcttccacatcga
tgtcaacaatgtgggatgcgatttacctctgcagatgctgcttttgacgcgcatatggac
tggcatttccgaagaaatagaaaggaacgagaatcgcttggaagaggtgctcacagaaaa
tggctacctagaatagaagaatggatacatgacacattattagctacccatacagataca
ttgtctcccacgcgtaatcacaaggccaccgtatctgccgaacgattagctcaattgaga
caaaagtgggtaaaggttccagaaaatctgaaggagaaggcatctgtgtgtcccgtgtgt
aaagaagccttcaaagcagagtggtccgaagctgaagaggagtggatctggaagaatgcg
ctgaatatcaatggcaattattatcatgccacttgtcgagctgagcagacgtctgctttg
aaacggctaagggctgctgatcccaacagacgcacctcgaccagtggcagtccaagaacg
acaccgtctaatgatttgcctaaaatggaaaatcaaaagagaaaagccggcgagggtgaa
caggacgatgagagtgcaaagagggttaaagcggaaaactataatgaatag
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