KEGG   Cryptococcus depauperatus: 91087926
Entry
91087926          CDS       T10265                                 
Symbol
L203_103716
Name
(RefSeq) pre-mRNA-splicing factor RSE1
  KO
K12830  splicing factor 3B subunit 3
Organism
cdep  Cryptococcus depauperatus
Pathway
cdep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cdep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    91087926 (L203_103716)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cdep03021]
    91087926 (L203_103716)
   03041 Spliceosome [BR:cdep03041]
    91087926 (L203_103716)
   03036 Chromosome and associated proteins [BR:cdep03036]
    91087926 (L203_103716)
Transcription machinery [BR:cdep03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     91087926 (L203_103716)
Spliceosome [BR:cdep03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    91087926 (L203_103716)
 Complex B
    91087926 (L203_103716)
 Complex C
   U2 SnRNP specific factors
    91087926 (L203_103716)
Chromosome and associated proteins [BR:cdep03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     91087926 (L203_103716)
    TFTC complex
     91087926 (L203_103716)
SSDB
Motif
Pfam: CPSF_A Beta-prop_RSE1_2nd Beta-prop_RSE1_1st Beta-prop_EML
Other DBs
NCBI-GeneID: 91087926
NCBI-ProteinID: XP_066069205
UniProt: A0AAJ8JU43
LinkDB
Position
4:join(1052412..1052562,1052625..1052647,1052703..1052757,1052815..1052929,1053050..1053112,1053167..1053175,1053234..1053348,1053401..1053493,1053547..1053640,1053693..1053895,1053949..1054127,1054173..1054531,1054582..1055449,1055501..1055669,1055718..1055837,1055886..1056092,1056140..1056265,1056315..1056673,1056720..1056849,1056899..1057117)
AA seq 1218 aa
MHLLNLTLSSPTNVTAAVVGSFSGSKSQEILSVRGGTKLEISKLNATTGQLDTVCSFEMF
GTVRNIAGFRLAGMAKDYILVTSDSGKLSILEFVVSPTPHFESLYQEVYGKTGSRRVVPG
QFLAVDPKGRSCLIGSLEKTKLVYVLNRNSEGKLFPSSPLEAHKNHTLVTHVIGVDQGYD
NPMYAALEIDYSESDQDPTGEAFQNAQKYLTFYELDLGLNHVVRKWSEPTDRRANLLIQV
PGGQSANSDRFDGPSGVLICTEDHIIWKHMDADAHRIPIPRRRNPLVQRGESSRGLIIVS
AVMHKIKGAFFFLLQSEDGDLYKVWIDHSGEDVVAIKIKYFDTIPVANSLCILKRGYLYV
ASEFSDQHLYQFQSLAEDDGEQEWSSIDYPENGNIDGPLPFAFFNPRPLQNLLNVDTLPS
LDPITDAHVVNLLGTSSDTPQIYAACGRGPRSTFRTLKHGLDVALMVSSPLPGVPTHVWT
LKLTQEDEYDSYIILSFPNGTLVLSIGETIEEVNDTGFLSSGPTLAVQQLGNAGLLQVHP
YGLRHIRGADRVDEWPAPPGVTIVAATTNQRQVVIALSTAELVYFELDPEGSLSEYQEKK
TLPGNATCVGIAEVPEGRRRTPFLAVGCDNQTVSIISLEPDSTLDTLSLQALTAPPTSIC
LAEIFDTSIDKNRATMFLNIGLMNGVLLRTVVDPIDGSLSDTRLRFLGAKPPKLVRSTIH
GQPSVMAFSSRTWLLYTHQDMLQTQPLIYDTLEYAWSLSAAMCPDGLIGISGNTLRIFTI
PKLGEKLKQDSTPLSYTPRKFISHPYSPIFYMIEADHRRYGPSAIERILKEKEAAGDRID
KTLLELPGDEFGRPRAAASHWASCIRVLDPLANETIQKFELDEDEAAFSIAIAYFERGGG
EPFLVVGTGIKTTMQPKGCKGGWLRVYSIKEQGRELELLNKTKTDDIPLCLAGFQGFLLV
GVGKSLRLYEMGKKALLRKCENNSFPTAVVTINVEGARIIVGDMQESTFYCVYRSIPTRQ
LLIFADDSQPRWLTCVTNVDYETVACGDKFGNIFINRLDPAVSEKVDDDPTGATILHEKS
FLMGAAHKTEMIAHYNVGSIVTSITKVSLVAGGRDVLVYTTISGAVGALIPFVSTDDVEF
MNTLEMHMRAQNTSLVGRDHLAYRGYYVPVKSVIDGDLCESFNLLPYPKQQVIAADLDGI
SVGDVLKKLEQMRTSSAF
NT seq 3657 nt   +upstreamnt  +downstreamnt
atgcatctcctcaatctcaccctctcctcaccgacaaatgttactgctgctgtagttggc
agtttttcgggttccaaaagccaagaaattctatctgtcagaggcggaacaaaattagaa
atttccaagcttaatgctaccactggacaattggacaccgtctgttccttcgagatgttt
ggaactgttcgaaatattgcaggtttcaggttggcaggcatggcaaaagattacatcctt
gtcacttcagattcgggcaaattatcaatccttgaatttgtggtttcaccaacgccgcac
tttgaaagtttgtatcaagaggtatatgggaagactggaagcagacgtgtcgttccaggt
caatttctggcagtggaccctaaaggtcgtagttgtctaattggatcacttgaaaagact
aagcttgtctatgttctaaatcgaaattctgaaggaaaacttttcccttcctcgcccctt
gaagcacacaaaaatcacacattagtaactcatgttatcggtgttgatcaagggtatgac
aatcctatgtatgctgcattggagattgattactctgaatccgatcaagatcctactggg
gaagcatttcaaaacgctcaaaagtatctgactttctatgaacttgatttgggcctcaat
cacgtggtgcggaaatggagtgaaccaactgacagaagagcaaatcttttgatacaggta
cctggtgggcagagcgccaactctgaccgctttgatggtccttctggtgtcttaatctgc
acagaagaccacatcatatggaaacatatggacgcggatgcccataggatacccatacct
agacggagaaatcctcttgttcaacgaggagaaagcagcagaggattaattatcgtctcc
gccgtcatgcacaagatcaagggtgccttcttcttcttacttcaatctgaagatggcgac
ttgtacaaggtttggatcgatcatagtggagaagacgttgtggctataaagatcaagtat
ttcgacactatccctgtggcaaacagtctttgtatcctcaaacgaggctacctctacgtg
gccagcgaatttagtgatcaacacttgtatcaattccaatctttagcagaggatgacgga
gaacaggaatggtcttccattgactatcctgagaatggcaacatcgatggtcctctcccc
tttgcctttttcaacccacggcctctgcaaaacctgctaaatgttgatactcttccatca
cttgatcccatcacagatgcccatgtcgtgaatcttcttggtactagttccgacacccct
caaatatacgctgcttgtggaagagggccaagaagtacatttagaacgctaaaacacggt
ctggatgtggctctcatggtgagctcaccattacctggtgtgccgactcatgtctggaca
ctgaaattgacccaagaggatgagtatgattcctatattattctttctttccctaacggc
accctcgtactctctatcggagagactattgaagaggtcaatgacactggattcctctcc
tcaggtccaactcttgctgttcaacaactgggaaacgctggtcttctccaggtccacccc
tatggacttcggcacattcggggtgctgatcgtgtcgatgaatggcccgctcctcctggt
gtgaccattgtagctgcgaccaccaatcagagacaagttgttattgccctgagtactgcc
gagctagtatattttgagctggatccggaaggaagtctgagtgaataccaggaaaagaag
acacttcccggcaatgctacatgtgtcggcattgcggaagtccccgaagggagaagaaga
accccatttcttgcagttggatgtgacaaccagactgtatccattatctccttggagcca
gatagcactcttgacactcttagtttgcaagctctaactgctcctccgacatccatctgt
ctcgctgagatctttgataccagtatagacaagaaccgcgcgactatgttcctcaatatt
ggtttgatgaacggtgttcttctacgtactgttgttgatcctattgacggctcgctttcg
gatacgagacttcgattccttggtgcgaagccgcccaaacttgtccgttctactatccat
ggtcaacccagcgtgatggcgttttccagcagaacatggcttctctacacacatcaggat
atgttgcaaactcagcctcttatttacgatacacttgagtatgcgtggtctttgtctgcg
gctatgtgtcctgatgggttgattggaatatctggaaacactctccgaatttttacgatt
cccaaacttggcgaaaaactcaaacaagattctacccctttatcatatactcctcgtaaa
ttcatcagccatccttacagtcccattttttacatgatcgaggccgatcacagaaggtat
ggccctagtgctattgagagaatcctcaaggaaaaggaggccgctggtgaccgaatagac
aagacactattggaacttccaggggatgaatttggtcgaccaagagccgctgctagccac
tgggcatcttgcatacgggtcttggatcctcttgctaatgaaacaattcaaaagtttgag
cttgatgaagatgaagctgctttttcaattgcaattgcctatttcgagcgtggtgggggc
gaacctttcctagttgtgggcactggtataaaaacaaccatgcaacccaagggatgcaag
ggaggatggttacgggtctattcaatcaaggaacaaggtcgagaactagaactgctaaat
aagaccaaaaccgatgatattcctctatgcttggctggattccaaggattcttgttagta
ggagttggtaaatcattgagattatacgagatgggcaaaaaggctttattgagaaagtgt
gaaaataacagcttcccgaccgctgtcgtcaccatcaacgttgaaggcgcacgaatcatt
gttggtgacatgcaagagtccacattctactgtgtctatcgatccattccgactcgacaa
ttgcttatcttcgccgacgattctcagccgcgatggctcacttgtgtcaccaatgttgat
tatgagacggtggcttgtggcgacaagtttggcaacattttcatcaacaggctggacccc
gctgtgtctgaaaaggtagacgatgatcccaccggcgcgacaatcttgcatgaaaagagt
ttcttgatgggggcagcacacaaaacggaaatgatagcacattataacgtgggcagtatt
gtcacatccattacaaaggtgtcgttggtagctggaggccgagatgttttggtctacact
accatttcaggagctgttggcgctcttataccatttgtctctactgatgacgtcgaattt
atgaacacattagaaatgcatatgagagctcaaaacacctccctcgttggaagagatcac
cttgcttatcgaggttattatgtgccagtaaaatccgtcattgatggcgacctttgcgaa
agcttcaacttgttaccgtacccaaaacaacaggtcattgcggcagatcttgacgggatt
agcgttggcgatgtgttgaagaaactcgaacaaatgaggacaagcagtgcgttctag

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