Cryptococcus depauperatus: 91088200
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Entry
91088200 CDS
T10265
Symbol
L203_103990
Name
(RefSeq) uncharacterized protein
KO
K11600
exosome complex component RRP41
Organism
cdep Cryptococcus depauperatus
Pathway
cdep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
91088200 (L203_103990)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdep03019
]
91088200 (L203_103990)
Messenger RNA biogenesis [BR:
cdep03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
91088200 (L203_103990)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
91088200 (L203_103990)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
91088200
NCBI-ProteinID:
XP_066069477
UniProt:
A0AAJ8JUN7
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All DBs
Position
4:join(1745620..1745903,1745950..1746065,1746119..1746344,1746398..1746407)
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AA seq
211 aa
AA seq
DB search
MYSSRTEILNDGGLRVDVRRPYELRSTTFRLGTHPACDGSATVIQGLTHVQVSIFGPREP
QNRAQVNHDRASVVVEVGIVPWVTGGGAKKTRGDKRLQEIGAAIRQTFEPVIMTQLYPRS
EIAIDVQVLAADGGILPIAINATTLALLDAGISILDYVTSVSVGLHLKQPLLDLCQPEES
DIPFVVIASLPTSGKITLAQMETRLHVDLDG
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgtattcttcaagaacagaaatactcaacgatggcggactcagagtggatgtgagaagg
ccatacgaactacgctcaacgacctttaggcttggaacacatccagcatgcgatggatct
gctactgtcatccaaggactcactcacgtccaagtctctatatttggacctcgcgaacca
caaaacagagcccaggtcaatcatgatagagcgtctgtagtcgttgaagtaggcatagtc
ccatgggtgactggtggtggcgcaaagaagactcgaggtgacaaacggttacaagagatt
ggagcagctataagacagacatttgaaccagtcatcatgactcagctctacccgcgaagc
gagattgctatcgacgtccaggtacttgctgcagatggaggtatccttcctatcgccatc
aacgccactactcttgccctccttgatgcgggcatatccatccttgactatgtcacatca
gtttccgtcggcttacatctcaaacaaccccttctagacctctgtcaaccagaggaatcc
gacattccgttcgtcgtgattgcttcccttcctacgtctggcaaaattacattggcgcag
atggagacccgtctgcatgttgatctagatggatga
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