Cryptococcus depauperatus: 91088340
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Entry
91088340 CDS
T10265
Symbol
L203_104130
Name
(RefSeq) uncharacterized protein
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
cdep Cryptococcus depauperatus
Pathway
cdep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
91088340 (L203_104130)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cdep03041
]
91088340 (L203_104130)
Enzymes [BR:
cdep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
91088340 (L203_104130)
Spliceosome [BR:
cdep03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
91088340 (L203_104130)
Complex C
U5 SnRNP specific factors
91088340 (L203_104130)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_22
PhoH
Motif
Other DBs
NCBI-GeneID:
91088340
NCBI-ProteinID:
XP_066069615
UniProt:
A0AAJ8M1B3
LinkDB
All DBs
Position
4:join(2102871..2102943,2103060..2104561,2104615..2105864,2105919..2106004,2106066..2108503,2108548..2109248,2109301..2109641,2109694..2109794)
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AA seq
2163 aa
AA seq
DB search
MSKKGGKDLSQFSYGAMSSLVVNQDRSVVRSDEPTGAPESLVGRIDLKAMGSRVSREAPK
DLTKRKSKISSSNRTSADEVERQIRHQQEKSRALMGASGVLDAVAEMEGLKYKPKTAETR
EVYELILGLIHQILGDQTQEIIRSATDTVLESLKSEDLKEFDKRKDVEGVLSAVDESTWS
QLINLSKKITDYTEEEEGATGEERGVDQEGVAVLFEDEDEEEEEGDFELGGAGTDGDGDE
EQDEDEDEDEDETEIKQEDVNDALVLGGKSKGLSSPNQDPDRIPPREIDAFYLQRLISTF
YPDPVQSSDFTSQSLVLLGSEMEGRDLENSLAEMFGYENFDLVAKMMRNRETLVWCTKFA
RADENERQDVEVAMREKGLGWILRELKGTQKVTSAEDFKEKIDKPIPNTATIKPGTIVQP
RKTIDIDSLIFSEGSHLLSRKKVKLPEGSFKRQFKGYEEIHVPEPKKRNPVVGELVSISS
MPEWTWPVWEAVKTRDLNVIQSKVFECAFKSSEPMLICAPTGAGKTNCAALTILRAISQF
RDSETGIIDKDSFKIIYVSPMKALVQEQVDAFSKRFSSLDIRVAELTGDSQLTKQQISET
QIIVTTPEKWDVITRKSTDTSYTNLVRLIIVDEIHLLHDDRGPVLESILARTIRRSEQTQ
DDVRIVGLSATLPNYKDVAAFLRVDPKKGLFYFDASYRPVGLKQQFVGVSEKKAIKRLQV
INEVCYEKVLNYAGKSQTLVFVHSRKETGKTAAFLRDTAMEKETLTQFINPEGASREILL
QEASQVKDSKLKDLLPFGFGIHHAGMSREDRTTVEQLFFEGHIQVLCCTATLAWGVNLPA
HTVIIKGTQVYNPEKGKWSELSPQDVLQMLGRAGRPQFDTYGEGIIITNHGELQYYTSLM
NQQLPIESQFVSKMVDNLNAEIVLGNVRNRDEGVQWLGYTYLYVRMLGSPALYNVGADYM
EDDGTLVQKRADLIHSAAVLLEKGGLVRYDRANGVFQSTELGRIASHYYIAYTSMSIYNK
HLKPNLTLIDLFRIFALSNEFRLIPVRQEEKLELTKLIERVPIPVKEGVDEPIAKINVLL
QAFISQLKLSGFDIVTDMVFIQQSAGRILRAIFEICLKKGWAGPMRAALDLCKMVERRMW
KSMSPLRQFVRIRGEIIQKAERKDFPWYRYFDLDAAELGELIGLPKSGQYIESLVHKFPR
LDLQAHVLPLTRSLLKINVTITPDFAWDRDIHGLSQAFWVIVEDVDGETILYHDQFVLRE
RFAQDEHYMTITVPISEPAPPNYYLSVISDRWLQSETKLPISFAHLIRPEPFPPHTPLLE
LQPLPTSALHNKAFESLYPYEHFNKIQTQVFQALFTTDDNVFIGAPTGSGKTICAEFALL
RLWSKKDPPRAVCIQPYQEMVDSRAVEWSSKFEPLQKVVVALTGETTADLALLRKADVVI
CTPAQWDMLSRRWRARQDVSNIGLMIADELQLIGGDVGSTYEVIVSRTRYVSQQTGINTR
IVACSVSLSNARDLGDWIGASNQTVFNFSPAARPLPLEVHLQSFNVPHFPSLMLAMAKPA
YLAIVEHAATRPTICFVASRKQCKLTANDILMYCLADDDEEKFLNVDRSELDKHLEKIDD
EDLKETLRYGIGYYHEALSKKDQKIVSILFDLGAITVLVASKDSSWSLPVTSYMVIIMGV
QYFDGQEHRYVDYAIADVLQMMGRACRPQIDTSSRCVFMCQQTRKDFFKKFLNEALPVES
SLPSYLHDHFNAEIVAKTIENKQDAVDWCTWTWFYRRLMQNPGFYNLQGTSPTHVADYLS
ELVETTLNDLVESDCIIIQDDMDTLPNNLGMIASFYYISNITVETFSASIKETTKLKGLL
EIVSSAHEFETVPIRHHEDSLLERIYDRVPVKVAKVDYSSPYFKTYLLLQAHFSRLTLPP
DLVIDQTFILGKVTGLLSACVDVMSSKSFLSCLGAMDLSQMCIQAIWDRDSPLKQVPYFD
NEVLGRFKAKGFDSVYDIMELEDDERNELLKMNDRQIARVAKFVNSYPNIEVTYTVEDAD
QLTTSDPVVIKVILDREADDDNPDDQVADAPHYPHKKLVSWWLVVGDEKTKTLYAIKKIT
VKANLETRLEFSLVEGTHNLKLFLICDSYAGADQDFDVEPLKVMEGQSSDEDDSDEDEME
VDK
NT seq
6492 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaagggcgggaaggatttgtctcagttctcctacggggcgatgagctctctc
gtagtgaaccaggaccgttccgttgtccgctctgatgagccaactggcgcacccgaaagt
cttgtaggcagaattgacctcaaggccatgggctcgcgcgtctctcgcgaagctcccaaa
gaccttacaaaacgcaagtccaaaatatctagctctaatcgtacttcagccgatgaggtt
gagcgacaaatacgccatcaacaagaaaaatcacgagcacttatgggtgctagcggtgtg
ctagatgcagttgccgagatggaaggtcttaagtataagccaaagacagccgaaacaaga
gaagtttacgaattgattcttggattaattcatcagattcttggtgaccaaacacaagag
attatcaggtcagcgacagatacagtgctagaaagcctcaagtcggaagacttgaaggag
tttgataagcgcaaagatgtggagggcgttttgtccgccgttgatgagtcgacttggtct
cagctcatcaatctttccaaaaagattaccgactatacagaagaagaggaaggagctact
ggagaggaacgcggagtcgatcaagagggcgtagctgtattatttgaagacgaagatgaa
gaagaggaagagggagattttgagctaggtggtgcaggaacagatggtgatggcgatgaa
gaacaagacgaagacgaggatgaagatgaagatgaaaccgagattaaacaagaagatgta
aatgacgcccttgttctaggcggtaaatccaagggactgtcttcgcccaaccaagatcct
gatagaataccgcctcgtgaaattgacgcattttatcttcaacgtctcatttctactttc
taccccgaccccgtacaatcatccgattttacctctcagtcccttgtattgcttggctcc
gagatggaaggtcgtgatttggagaactccttggcagagatgtttggctatgaaaatttc
gacttggttgccaaaatgatgaggaacagggaaacccttgtctggtgcacaaagtttgcg
agagcagatgaaaacgagagacaagatgtagaagtggccatgcgtgaaaaaggtttggga
tggatattgagggaattgaaaggaactcagaaagttacttctgctgaagatttcaaggag
aaaattgataagcctattccaaacacggcaaccatcaaacctggaacaattgtacagccc
cgcaaaactatagacattgactctctcatcttttctgaaggttctcatcttctttcgcgt
aaaaaagtcaaacttcctgaaggctctttcaagcgtcagttcaaaggctatgaagagatt
catgtacctgaacctaaaaagagaaatccggttgtgggtgagttagtctccatctccagt
atgccggaatggacatggcccgtttgggaagctgtcaaaacaagggatttaaatgttatt
cagagcaaagtttttgaatgtgccttcaaaagcagtgaaccaatgttgatttgtgcgcct
actggtgctggaaagaccaattgtgcggcactcacgattcttcgggcaatttctcaattc
cgcgattccgagactggtattattgacaaggattctttcaagattatatatgtttcgcct
atgaaagctcttgttcaagaacaagttgatgcgttctccaaacgtttctcctcgcttgat
attcgcgttgctgaacttaccggtgatagtcaattgactaagcaacaaataagcgaaact
caaattattgtcacgactcctgagaagtgggatgttataacacgaaaaagtacagatacc
tcgtacacaaatctggtcaggttgattattgtggacgaaatccatcttttacatgatgat
cgtgggcctgttcttgaatcaattttagcaagaacaattagaaggtctgagcaaacacag
gatgacgtacgtattgttggattatcggctacgttgccaaattacaaggatgttgctgct
ttccttcgagtcgatccgaaaaagggtctcttctacttcgatgcctcctacagacctgtg
gggctcaagcaacaattcgttggtgtttccgagaagaaagctatcaaacggctacaagtg
atcaatgaagtgtgttatgagaaagtattgaattatgctggaaaaagccaaactctcgtt
tttgttcattcaagaaaagagacgggaaaaactgcagcatttttgagagatacagctatg
gaaaaagagactcttacgcagttcattaacccagaaggcgccagtagagaaattcttctt
caggaagcaagtcaagtcaaggatagtaaacttaaagacttattgccttttggatttggt
atacatcacgcgggtatgtctcgcgaagaccgaacaactgtcgaacaattattctttgaa
ggccatattcaggtgctttgttgtacagcgacattagcttggggagtcaatcttccagca
catacagtcatcatcaagggtacacaagtttacaatcccgaaaagggcaagtggtctgaa
ctttccccgcaagacgtactgcaaatgctaggtcgagctggacgaccccagttcgacaca
tatggcgagggtatcattattaccaatcatggcgaattgcagtattacacaagtttgatg
aatcaacaactaccaattgagagccaatttgttagtaaaatggttgacaatctaaatgcg
gagattgttttaggcaacgtgagaaatagggatgaaggcgtacagtggctaggctatacc
tatttatatgtgagaatgcttggctcgcccgctttgtacaatgttggcgcagattacatg
gaagacgatggcacgcttgtgcaaaagcgagctgatcttatccactctgccgccgtcctt
cttgaaaaaggcggtcttgttcgttacgatcgcgctaacggggttttccagtcaaccgaa
cttggccgaattgcatcgcactactatattgcctatacttctatgtccatttataacaaa
cacctcaaaccaaatcttactttgattgatctctttcgaattttcgctctttctaacgag
tttaggctcattcctgtccgacaggaggagaagcttgaattaacgaagttgattgaaaga
gtgccaattcctgtcaaagagggtgtggatgagccgatagcaaagattaatgttttgtta
caagcattcatctcgcagctcaagctctccggattcgacatcgtcacagatatggttttt
attcaacaatcagcagggcgtattctgcgagcaatttttgagatctgtctcaaaaagggt
tgggcagggccgatgcgcgcggctttggatctttgcaagatggtggaacgtcgcatgtgg
aagagcatgagtccattgaggcaatttgtgaggattcgaggtgagatcattcaaaaagcg
gaaagaaaggactttccttggtatcgttacttcgaccttgacgctgccgaactgggagaa
ttgataggattaccaaaaagcggacagtatattgagagcttagttcataaattccccaga
ctcgatttgcaagctcacgttttgcctctaactcgatcattgcttaaaatcaatgttact
atcactcccgatttcgcctgggatcgcgatatccacggattaagccaggctttttgggtg
atcgttgaagatgtggatggtgaaaccattttgtatcacgaccaatttgtccttcgagaa
agatttgcccaggacgagcactacatgacaatcactgtccctatctctgaaccagctcct
cccaactactatctttctgtcatatctgaccgatggcttcagtctgaaaccaaacttcca
atctcctttgctcacctcatcagacctgagcctttccctcctcataccccattactggaa
cttcaacctcttccaacatcagctttgcacaacaaagcttttgagtctctttatccgtac
gagcatttcaacaaaattcagacccaagtatttcaagccttgttcaccacagatgacaat
gtcttcataggagcgcctacgggtagcggaaagacaatctgtgcagaatttgctttgttg
cgactctggtcaaagaaagacccaccaagagctgtctgcatccagccctatcaggagatg
gtagattctcgtgctgtagaatggtcaagcaagtttgagcctttgcaaaaggtcgttgta
gccctgaccggtgaaactaccgctgaccttgcgcttttgagaaaagcagacgttgtcatt
tgcacacctgctcaatgggatatgttgtctaggcgatggagagctagacaagacgtatcg
aatattggattaatgatcgcagatgaacttcagttgattggtggtgatgttgggtctact
tatgaagtgattgtttcacgaactcgatacgtctcgcagcaaacaggcatcaacactcgt
attgttgcctgttctgtcagtttgagtaacgctagagaccttggagactggattggcgct
tcgaatcagacagttttcaatttttcgcctgcagctcgaccattacctctcgaagttcat
ttacaatccttcaatgttcctcatttcccaagcttgatgctggcaatggctaaacctgct
tatcttgctattgttgaacatgcagcaactagacctactatctgtttcgtcgcttcacgc
aagcagtgcaagttaaccgccaatgacattttgatgtactgtctggccgatgacgatgag
gaaaagttcctcaatgtcgacagaagtgaattagacaaacatttggagaagattgatgat
gaggatcttaaagagactttgagatatggtattggctattatcatgaggctttgagtaaa
aaggatcaaaaaattgtttcaattctgttcgatttgggcgccatcactgtgcttgttgca
tccaaggactcttcttggagtctacctgtgacttcctatatggttataatcatgggggtg
cagtactttgacggtcaagaacatcgatatgtggactatgctattgcagatgttcttcaa
atgatgggacgtgcttgtcgacctcaaattgatacatcatctcgttgtgtttttatgtgt
caacaaacccgcaaagatttcttcaaaaaattcctgaatgaagctttgcctgtagagtct
agcttaccgagctacttgcatgatcattttaacgcagaaatcgttgcaaagacaatcgaa
aataagcaggatgcggttgattggtgtacttggacttggttctacaggcgattgatgcaa
aaccccggattttataacctacaaggcaccagtcctacacatgttgccgattacctttcc
gagcttgttgaaaccactttgaatgatttggttgagtcggactgtattattatccaagat
gacatggatactcttcccaataacttgggtatgattgcatccttctattatatctccaac
attactgtagaaaccttctctgcctccattaaggagaccaccaaactcaagggtttgttg
gaaattgtctcctccgcccatgaattcgagacagtacccatcaggcatcacgaggactct
cttttggagaggatatacgaccgagtgcccgttaaagtcgccaaggtagactacagctca
ccatacttcaagacatacctactactccaagctcatttcagccgtcttactctccctcct
gatctcgtcatcgaccaaactttcatccttggcaaagtcacagggttactttcagcttgt
gtagacgtcatgtcttccaaatccttcctgagctgccttggtgcgatggatctgagccag
atgtgtatacaggcaatttgggaccgagattcacccctgaagcaggtaccatactttgat
aatgaagtgctggggagattcaaggcaaagggcttcgactctgtatacgatattatggag
cttgaagatgatgaaagaaatgagttgttgaagatgaatgatagacaaatcgcccgggtt
gctaagtttgtgaactcttaccctaacattgaggttacatatactgtcgaagacgccgat
cagttaacaacatccgaccccgtcgtcatcaaagttattctcgacagggaagccgacgat
gacaatcccgacgatcaagtagctgatgctcctcactaccctcacaagaaattggtatct
tggtggcttgttgtaggtgacgaaaagaccaagactttatacgctatcaagaaaattacc
gtcaaagccaacttggaaacgaggctggagttctctttggtggaagggacacacaatctc
aaattgtttttgatctgtgatagctatgctggcgccgatcaagactttgatgttgagcct
ttgaaagttatggaaggacagagttcagacgaggatgactctgatgaagatgaaatggag
gtggataaatag
DBGET
integrated database retrieval system
