Cryptococcus depauperatus: 91088373
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Entry
91088373 CDS
T10265
Symbol
L203_104163
Name
(RefSeq) uncharacterized protein
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
cdep Cryptococcus depauperatus
Pathway
cdep03013
Nucleocytoplasmic transport
cdep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cdep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
91088373 (L203_104163)
03015 mRNA surveillance pathway
91088373 (L203_104163)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdep03019
]
91088373 (L203_104163)
03041 Spliceosome [BR:
cdep03041
]
91088373 (L203_104163)
Messenger RNA biogenesis [BR:
cdep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
91088373 (L203_104163)
Spliceosome [BR:
cdep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
91088373 (L203_104163)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
PWI_CCDC43
Motif
Other DBs
NCBI-GeneID:
91088373
NCBI-ProteinID:
XP_066069648
UniProt:
A0A1E3HIZ4
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All DBs
Position
5:join(40414..40426,40474..40505,40550..40615,40664..40795,40850..40981,41025..41867)
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AA seq
405 aa
AA seq
DB search
MADIGMRGSSASQDIRFKDKVAQSIKATKFPKHFSEKVDLRKVNISVLRPWIAEKITALL
KVEDDIVVEYVFGMLEDNDNPTPDPKQMQVSLVGFMDKFGAAAFMDQLWKLLLSAQKTVG
GVPAEFIEAKKAELQAQQALKQSTSPTGRPARPSADEYLNADLDPHLTSDRASPPRGYQD
RDYHSRNQGRDRDRRYGFKDDGYGRRGSRGGRPSGVNRFADRSRDNGYASRAAFKGEHPP
YGRDQSPPYSRTSARRSPPRRRPTPPRRLSPSPQRRPRSVSRSISPPLRAERGRPRPRTL
TPPSPRAVQNRLSPHRRSVSVSRSRSPDRRRRRVSPSLSPYHSTGSSSPRRRRSYGSSRN
RNRSVTPQMRNKRDYTPTPSRSPSPRSRSISPRREPGRRNNGRRE
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggccgatattggaatgaggggctcaagcgcctcccaggatatcagattcaaagataaa
gttgctcaaagcatcaaagctacaaagtttcccaaacacttttcggaaaaggtcgacctc
cgcaaagtaaatatatctgtgttgcgcccatggatagcagagaaaatcacagccttactc
aaagttgaagatgacattgtcgtcgaatatgtttttggtatgcttgaggataatgataac
ccgactcccgatccaaagcaaatgcaagtctcccttgtaggcttcatggacaaattcggt
gctgcggcattcatggatcaactctggaaattgctcttatctgctcaaaagactgttggc
ggagtaccagcggagttcatcgaggcaaaaaaggcagaattacaagctcaacaagcattg
aaacaatctaccagccctacgggccgccctgctcggcccagtgctgatgaatacctgaat
gcggatctagatccacatctaacctctgatcgtgcttctccacctcgtgggtatcaggac
cgcgattaccattcgcgtaatcaaggccgagatagagataggagatatggctttaaagat
gatgggtatggaaggcgtggtagccgaggcggacgaccgagtggtgtgaataggtttgca
gatagatcacgagacaacggctatgctagtcgtgccgccttcaaaggcgaacaccctcct
tatggacgtgaccagtcgccgccatattctcgtactagtgcaagacgttcgccgcctcgc
cgtcgtcccacgcctcctcgtcgcctctcgccctcaccccagcgtagaccacgctcagtc
tccagatccatctctccacctttaagagcagaacgtggccgcccgaggccgcggacactg
acaccaccctctcctcgggcggtgcaaaacaggctttcccctcatagacgatccgtttcg
gtgtctcgatctcgttctccagatcgccgacgccgccgagtctctccttctctatcacct
tatcacagtacaggatcatcctctccacgaagacgacgctcctatggttcaagcagaaac
agaaacagaagtgtcacgccgcagatgagaaacaaaagagactatacaccgactccttca
cgtagtccgagtccaaggagtcgcagtatcagcccgagaagagagccagggagaaggaat
aatggtcggcgggaatga
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