Cryptococcus depauperatus: 91089183
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Entry
91089183 CDS
T10265
Symbol
L203_104974
Name
(RefSeq) uncharacterized protein
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
cdep Cryptococcus depauperatus
Pathway
cdep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
91089183 (L203_104974)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdep03019
]
91089183 (L203_104974)
Messenger RNA biogenesis [BR:
cdep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
91089183 (L203_104974)
mRNA degradation factors
5'-3' decay
Decapping complex
91089183 (L203_104974)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
91089183
NCBI-ProteinID:
XP_066070444
UniProt:
A0AAJ8JWK5
LinkDB
All DBs
Position
6:join(596287..596536,596593..596772,596822..596926,596973..597827,597880..598568,598621..599085,599138..599164)
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AA seq
856 aa
AA seq
DB search
MSGFFGFDTTLPDHRSGLQQGQGVAASSSKFQDASNVGQQFALEGGMDDEEMEVYTWGQG
LNKRLEEADEKNDTTFGVDINAIKEENSGLGKEDPLKASFAQVKQPLSRGPVASTASRFR
PKVAADPFAFSEDDFYSSRPVTTKSQAKLRNKPSTHALKESWTKPAGQVTTWGAAPSANV
KPSPAAIHAQPGSQGHIKSLEEIEAEFASMSVPTTQVQVPPTQPPVKQETHILSLEELEK
QMMEEPQSQSSAQPQVFQHQAYGPSTQARPQQQEPPRQVTPTNHSLAPSGYASQQALLDS
MFPELSNASAPAIESGVQVGQAATTRTAQPPVASAEAIALQEHIKMVFETKVKSMSKYNN
FMGSSDKDFITRIQLSQLATDDPFVHDFYAQVFSALEKSRRAHESGQIDRPTVVQIAAGF
GFGVGGPSGNRFGKMGQNTMQKLSTQVKKLVESRTQHPKATNTAALQGALGRVTRGGAAA
PRPVLALPTNTKPENRPASHLNQQTGIKRDPLTRKQVMYALEGLYVDVLELEQLRRDPPH
PEARDELEIWNIQCQTKMEQIWSKLMVHEPIEVSNPHPFISLLNPPKGQRLLGRIILQLP
DQKIYTLLSLVVVNFYQLDVVARAPPPPIVDSSLLTKADRLDRQKRETDTDGFLYNVVPA
MDTAINKCKLGLLGGLLAMAVQRLDIVKIALTRPGIVLFTALLSKAQSLIRPSLADPLLS
HVALGADPIEIEHWPRQFSAFLNVLLPSLADLFPSSIAAKHAYGPAAYLVNGENLPEREG
VEMERREAEVWGFAAALAVNATEEEQTALVAALRDKILYTVQGARSKSMSPQRAEMKLRN
VNMFLNGLGLDAAMIE
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcttctttgggttcgacacaacccttccagatcatcgttcaggtctacaacaa
ggacaaggtgtcgctgcaagttcatctaaatttcaagatgcgagtaacgttggacaacag
tttgctttggaaggcggaatggatgatgaagagatggaagtatacacatggggccaaggc
ttgaacaagaggttggaagaagcagatgagaagaatgatacgacctttggtgtggacatc
aacgcaatcaaagaagaaaactctggcttgggaaaagaagacccgctgaaggcgtctttc
gcccaggtgaaacagccattatctagaggtcctgtagcttctaccgcttctcgatttcga
cccaaggttgcggcagaccctttcgccttctctgaggatgacttttattcttctcgccca
gtgaccacaaagtctcaggcaaagctcagaaacaagccttctactcacgccctgaaggag
tcttggactaaacctgctggtcaagtgaccacatggggtgctgctccttctgctaatgtc
aaaccttctcccgccgctattcatgcccaaccaggttctcaaggtcatatcaagagtctt
gaagagattgaagcagaatttgcttctatgtctgtacctactactcaggttcaagtgccc
cccacacagccgcctgtcaagcaagaaactcatattctatcattggaggaacttgagaag
caaatgatggaggaaccccagtctcaatcctcagctcagccgcaagttttccaacaccaa
gcttatgggccatccacacaggctcgaccccagcagcaagagcctcctagacaggtgact
ccaacaaaccattccctggctccgtccggttatgcttctcagcaagccctccttgatagc
atgtttcccgaactcagcaatgcctcggcacccgcgattgaatctggagtacaagttggg
caagccgctactactcgaaccgcccaacctcccgttgcgtcagccgaagctattgccctt
caggaacacatcaagatggtatttgaaaccaaagtcaaatcaatgtccaaatacaacaac
tttatgggttcatcagacaaagatttcatcactcgcatccagctctcacaacttgctact
gatgatccttttgttcatgatttctatgcacaagtattctctgctctagagaagagcaga
cgagcgcacgagtctggacaaattgatcgtccgacagtcgtacaaattgcggctggattt
ggatttggtgttggtggaccatcaggtaaccgtttcggcaaaatgggacagaacaccatg
caaaagctctctacccaagttaagaagctcgttgagagcagaactcaacatcctaaagcg
acaaacacggctgcacttcagggggcccttggtagagtgactcgaggtggtgctgctgca
ccccgtccagtattggccctaccaacaaacactaagccggagaatcgccctgcttcccat
ctcaatcagcaaactggcatcaaaagggacccccttacacgtaagcaagttatgtacgcc
cttgaaggcctctacgtcgacgtattggaactagaacaacttcgccgcgaccctcctcat
cctgaggctagagatgaactcgagatttggaacatccagtgccagacaaagatggagcaa
atctggagcaaattaatggttcatgaacctattgaagtcagcaatcctcaccctttcatt
tctctcctcaatcctccaaaaggccaacgtctgctgggccgtattatcctgcaacttccg
gatcaaaaaatttacactcttttgtcacttgttgtagtcaacttttatcagctcgatgta
gtcgctcgcgcacctcctccacccattgtagactcgagtcttctcactaaagccgaccgc
ctggataggcaaaagagagagacagatacggatggctttttgtacaatgttgtacccgcg
atggatacggcaatcaacaaatgcaaacttggcctattgggcggtctactagccatggct
gttcagagattggacattgtgaagattgctttgacccgacctgggatagtcctttttact
gcccttttgtccaaagctcagtcactcatccgaccatcccttgctgatcctcttctctca
catgttgctcttggagccgatcctattgagattgagcactggcctcgtcaattctctgcc
ttccttaacgtcctactcccatcgttggccgacctctttccatcttcgatagctgccaaa
catgcgtatggccctgcagcttaccttgttaacggagagaatctacctgagagagaaggt
gtggaaatggagcgacgagaggcagaggtatggggttttgcagcagcgctagctgtcaat
gcgacggaggaggaacaaactgctttggtggctgctctaagagacaaaatcttgtacact
gttcagggcgcaaggagtaagtctatgagtccacaacgagcagagatgaagttgagaaac
gtcaacatgtttttgaatggtttgggcttggatgcggcgatgattgaatga
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