Cryptococcus depauperatus: 91090167
Help
Entry
91090167 CDS
T10265
Symbol
L203_105959
Name
(RefSeq) uncharacterized protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
cdep Cryptococcus depauperatus
Pathway
cdep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cdep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
91090167 (L203_105959)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdep03021
]
91090167 (L203_105959)
03019 Messenger RNA biogenesis [BR:
cdep03019
]
91090167 (L203_105959)
Transcription machinery [BR:
cdep03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
91090167 (L203_105959)
Messenger RNA biogenesis [BR:
cdep03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
91090167 (L203_105959)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf-CCCH
zf-CCCH_2
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
91090167
NCBI-ProteinID:
XP_066071417
UniProt:
A0A1E3IXG4
LinkDB
All DBs
Position
8:join(148714..149110,149155..149244,149289..149348,149390..150858)
Genome browser
AA seq
671 aa
AA seq
DB search
MSVPLPSPQPFSASDHPGASAKPIPRSRPTPISTGVSSSHASAATPSSYKYRPGAATSVG
RSFNDGNWRDRSPAPTLPASASVGGGKAPERTVGFEKRDLSLMKGNGGSGLSQERENEDR
RDKEGGSGDKEKTALSHVPCRFFKAGACTAGESCPFSHAAPDAAKREVCQWFLKGNCKFG
HKCALAHVRPGEPMSMDRKNKKQAQLEARERDGKIPPGSSSLGEVSSINGYEAKSAVPTA
GSTHDDSVASPVPIRSALSSSIQSPPKIGSSPMREPFGPPSGALPNSPPTGFAHSLSRGH
PAFASSPNRPSPLSASFGAAGTGFAGSVPGPLSLKQGAIHPSTLSPLRPPVTAAPTFSSS
FSHSSSLVVERPPPGLATPLSASFAGDAPSLHKSIWARSDGPAEQLSPRQPISRTVPRRA
VFEDDEDQEDHGEEFLPSSLSDLLTPREKARRLSRRDSQASADEARGIAGGIWVAGERLA
QSAGATMGPKGFLQGLWSADGEDARKASVSGQGKDFAFGPSTAQHQGPRTSLLTQQRSPT
SASPTSPGQLLGSSSQAHVYSAQGEPYLVRNIGDPSSPSARALIEHAPGQSLPGGLASAL
SRLHLHGPKSPSGLLASPAAIGTPAGDVGAKGLSKEWRLVEHQEENRSDDEGAAPGKEGD
HEEEGLFTMDG
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgccactcccatcgccacagccgttctcggcgtcagatcatccaggcgcgtct
gcaaagccaatccctcgctcacgtccaacaccaatctcgactggcgtctcttcatcccac
gcgtcggcggccactccatcatcttacaagtatcgtccaggcgcggcgacctcggtcggt
cggtcgttcaatgatggcaactggcgcgatcggtcgccagcaccaactctccctgcgtcc
gcgtcggtgggtggaggcaaagcgccagagaggacggttgggtttgagaagcgggatttg
agtcttatgaaggggaacggaggcagtgggttgagccaagaacgggaaaacgaggatagg
agggataaggaaggtgggtctggcgacaaggaaaagactgccttgagccatgtgccctgt
cgatttttcaaagctggagcctgtacagctggcgagagctgtccattctcgcatgcggct
cctgatgctgccaagcgagaggtctgtcagtggtttttgaaaggaaattgcaaatttggg
cacaaatgtgctcttgcccatgtccgtcctggcgagcccatgtcgatggaccgcaagaac
aagaagcaagctcaactggaagctcgagagcgtgatggtaaaatccctcccggctcatcc
tctctcggcgaggtgtcctctatcaacggttatgaagccaagagcgcagtgccaactgcg
ggttcgacgcatgatgattcggttgccagtcctgtacctatccgatcggccttgagttct
tcgattcagagtcctccaaagattggatccagtcccatgagagagccatttggacctccg
tctggagcactacccaacagcccaccgacgggtttcgctcattctctcagccgtggtcat
cccgcgtttgcttcttcgccaaacagacccagtccgctctctgcaagttttggtgcagca
ggtaccggctttgccgggtccgttccgggtcctttatcactcaaacagggcgctatccat
ccttccactctctctccccttcgtccacccgtcactgctgctcccactttctcttcctca
ttctcccattcttcttctcttgtcgtcgaacgacctcctcccggcctcgctaccccctta
tcggctagctttgccggcgatgctccatcgctccataaatccatctgggcccgatcagat
ggtccggcagaacaactttctccccgccagcctatctccaggaccgtcccgaggagagcc
gtgtttgaagatgatgaagaccaagaggaccatggtgaagaattcttaccttcttcgctc
tcggatttactcacgccacgggaaaaggcgaggcgtctgtcaaggcgagatagccaagcc
agtgccgatgaagcccgtgggattgctggaggtatctgggtggcaggagaacggctggca
cagagcgccggagccacaatgggtcccaaaggatttctccaaggtctttggagtgctgac
ggagaagatgcaagaaaggcgagtgtttcagggcaaggtaaagactttgcctttggtccc
agtacggctcaacatcaaggcccacgcacatctcttctcacgcaacagcgtagtcccacg
agcgcttcgcctacgagtcctggacagctccttggctcgtcttcacaagctcatgtctat
tctgcacaaggcgagccttacttggtcagaaacattggagatccttcttctccctctgcg
cgagccttgattgagcatgcgccaggacaatcgctacctggtggattagcatctgcccta
tccagattacaccttcatgggccaaaatctcctagcggtctactcgctagccccgccgca
ataggcactccagctggagatgttggagcaaagggcttgagtaaagaatggaggctggtt
gagcatcaggaagagaatcgatcagatgatgagggagcagcacctggcaaagagggagac
catgaggaagagggtttgttcaccatggatggctag
DBGET
integrated database retrieval system
