Cryptococcus depauperatus: 91090185
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Entry
91090185 CDS
T10265
Symbol
L203_105977
Name
(RefSeq) ATP-dependent RNA helicase VAD1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
cdep Cryptococcus depauperatus
Pathway
cdep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
91090185 (L203_105977)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdep03019
]
91090185 (L203_105977)
03036 Chromosome and associated proteins [BR:
cdep03036
]
91090185 (L203_105977)
Enzymes [BR:
cdep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
91090185 (L203_105977)
Messenger RNA biogenesis [BR:
cdep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
91090185 (L203_105977)
mRNA degradation factors
5'-3' decay
Decapping complex
91090185 (L203_105977)
Chromosome and associated proteins [BR:
cdep03036
]
Eukaryotic type
Gene silencing
piRNA pathway
91090185 (L203_105977)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
91090185
NCBI-ProteinID:
XP_066071435
UniProt:
A0A1E3IUZ2
LinkDB
All DBs
Position
8:join(194980..194996,195044..195104,195151..195298,195348..195373,195419..195844,195887..196015,196066..196389,196440..196589)
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AA seq
426 aa
AA seq
DB search
MASSSASEDWKKGLIAPPKDLRPQTEDVTATQGSKFEDFGLRRELLMGIYTSGFEKPSPI
QEQAIPVALTGRDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQ
VCKTFGAHIPNLQVMITTGGTTLRDDILRLQQPVHILVGTPGRILDLGGKGIAGLNKCGV
FVMDEADKLLSEDFMPVIEQTLALCPQERQVMLFSATFPWTVKEFSDKHMVQPYEINLMD
ELTLKGVTQYYAYVEESQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKVTELGYSCF
YSHAKMQQAHRNRVFHDFRNGMTRNLVCSDLLTRGIDIQAVNVVINFDFPRTAESYLHRI
GRSGRFGHLGLAISLLTLEDRHNLYRIESELGTEIAPIPAAIDPVLYVAPTVAEDEERTS
PASGTR
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatcgtcggcctctgaagactggaagaaaggcctcatcgcgccaccaaaagat
ttgcggcctcaaacagaggatgttaccgcgacacagggatcaaagtttgaagactttggt
cttcgccgcgagcttctgatgggcatatacacttcaggatttgagaaaccaagcccaatt
caggagcaggctattcctgtggctttgactggaagagatatccttgcacgagccaagaat
ggtactgggaagacagcctcgttcatcatccccactctcaacagaatcaacacatcccta
tctcatattcaagctcttattcttgtaccgacacgtgaacttgctctccaaacatctcaa
gtatgcaaaacctttggtgctcatattcccaacctccaggtcatgattactactggcgga
actacattacgcgatgacatcttgcgtctacaacaacctgtgcatattcttgttggaacc
ccaggaaggatattggatttagggggcaaagggattgctggattaaataaatgtggagtc
tttgtcatggatgaagcagacaaactgttgagcgaagactttatgcccgtcattgaacag
actttggcactatgccctcaagaaaggcaggtgatgctcttttcggccacttttccatgg
actgtcaaagaattttctgataaacacatggtgcaaccatatgaaatcaaccttatggac
gaacttacacttaagggtgtcacacaatattatgcttatgttgaagaatctcaaaaggtt
cattgtcttaatactctattttcaaaacttcaaatcaaccaatcaattatcttttgtaat
tctaccaatcgggttgagttacttgctaaaaaagtcactgagctcggttactcttgtttc
tactctcacgctaagatgcaacaagcccatcgcaatcgagtcttccacgattttcgaaac
gggatgaccagaaatctcgtttgctctgatctattaactagaggaattgatatccaagca
gttaatgttgttataaactttgatttccctaggacagcagaaagttatctccatagaatt
ggtcgatctggacgattcgggcacttgggcttggctatttccctcttgactcttgaagac
agacataacctctaccgcattgaatctgaactgggcacagaaatcgcacctatccctgct
gcaattgatcctgtcttgtatgttgctccgaccgtagcagaagatgaggaacggacatca
cccgcatccggaacgaggtga
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