Cryptococcus depauperatus: 91090199
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Entry
91090199 CDS
T10265
Symbol
L203_105991
Name
(RefSeq) ATP-dependent RNA helicase FAL1
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
cdep Cryptococcus depauperatus
Pathway
cdep03013
Nucleocytoplasmic transport
cdep03015
mRNA surveillance pathway
cdep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
91090199 (L203_105991)
09122 Translation
03013 Nucleocytoplasmic transport
91090199 (L203_105991)
03015 mRNA surveillance pathway
91090199 (L203_105991)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdep03019
]
91090199 (L203_105991)
03041 Spliceosome [BR:
cdep03041
]
91090199 (L203_105991)
03009 Ribosome biogenesis [BR:
cdep03009
]
91090199 (L203_105991)
03012 Translation factors [BR:
cdep03012
]
91090199 (L203_105991)
Enzymes [BR:
cdep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
91090199 (L203_105991)
Messenger RNA biogenesis [BR:
cdep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
91090199 (L203_105991)
mRNA cycle factors
Stress granule specific factors
91090199 (L203_105991)
Spliceosome [BR:
cdep03041
]
Complex C
Other components
EJC/TREX
91090199 (L203_105991)
Ribosome biogenesis [BR:
cdep03009
]
Eukaryotic type
90S particles
Helicases
91090199 (L203_105991)
Translation factors [BR:
cdep03012
]
Eukaryotic type
Initiation factors
eIF-4
91090199 (L203_105991)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
91090199
NCBI-ProteinID:
XP_066071448
UniProt:
A0A1E3IXJ3
LinkDB
All DBs
Position
8:join(230864..230880,230928..230973,231055..231064,231115..231979,232031..232242,232292..232332)
Genome browser
AA seq
396 aa
AA seq
DB search
MAGINTGDEKLIFESSEAVSVAPTFEALNLKEDLLRGIYAYNFEKPSAIQQRAILPIIRG
RDVIAQAQSGTGKTATFSISMLQSIDSNIRETQALVLSPTRELAVQIQTVVLALGDYMNV
SCHACIGGTSVGEDIRKLEAGQQVVSGTPGRVFDMIRRRNLRTKDIKMLVLDESDELLNK
GFKDQIYDIYRYLPPATQVVVVSATLPHDVLEMTTKFMTDPIRILVKRDELTLEGIKQFF
VAVEKEEWKFDTLCDLYDTLTITQAVIFCNMRKKVDWLTEKMREANFTVSSMHGEMVQKE
RDAIMAEFRAGQSRVLITTDVWARGIDVQQVSLVINYDLPTSRENYLHRIGRSGRFGRKG
VAINFVTVDDVKILRDIEQYYSTQIDEMPMNVAELT
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggccggaataaataccggagacgagaaactcatttttgagtcttctgaagcggtctca
gtcgctcccacatttgaggctctcaatctgaaagaagaccttttgcgaggtatctatgct
tacaactttgagaaaccatcagctatccaacaacgtgccattcttccaataattcgcggt
agagatgtgattgctcaggctcagtccggtactggtaaaacagccacattctctatctca
atgcttcaatctatcgattccaacattcgtgaaactcaggcattggtgctttcccccact
cgtgaattggctgtccagattcaaactgttgtcctggcgttaggagattatatgaatgtt
tcatgtcatgcttgtattggaggtacaagtgtgggcgaggatatccgaaagcttgaggct
gggcagcaggttgttagtggtactcccggtcgagtatttgacatgattcgaaggaggaat
ttgaggacaaaagacatcaagatgcttgttctcgatgagtctgatgaacttctcaacaaa
ggtttcaaggaccaaatctacgatatctaccgttacctccctcctgccactcaggttgtt
gtggtctccgctactcttccgcacgacgtgctggagatgactaccaaattcatgacagat
ccgattcgtatccttgtcaagcgtgacgaattgacgcttgaaggtatcaagcagtttttt
gtcgctgttgagaaggaggaatggaaattcgacactctgtgtgatttgtatgatacttta
acaattacacaagccgtcatattttgcaatatgagaaaaaaggtggattggctgactgag
aagatgagggaagcaaactttaccgtcagtagcatgcatggtgagatggtgcagaaggaa
agagatgccattatggcggaatttcgtgcaggtcaaagtcgagttcttatcacaactgat
gtgtgggctcgtggtatagatgttcagcaagtttcgttggttatcaactatgacttaccc
acatcccgtgagaactacttgcatcgaatcggccgaagtggtcgatttggcaggaaaggt
gttgctataaattttgtgacggtcgatgacgttaagattctgagagatattgagcaatac
tattctacccaaattgacgaaatgcccatgaatgttgctgagttaacataa
DBGET
integrated database retrieval system
