Cryptococcus depauperatus: 91090232
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Entry
91090232 CDS
T10265
Symbol
L203_106024
Name
(RefSeq) uncharacterized protein
KO
K10756
replication factor C subunit 3/5
Organism
cdep Cryptococcus depauperatus
Pathway
cdep03030
DNA replication
cdep03410
Base excision repair
cdep03420
Nucleotide excision repair
cdep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cdep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
91090232 (L203_106024)
03410 Base excision repair
91090232 (L203_106024)
03420 Nucleotide excision repair
91090232 (L203_106024)
03430 Mismatch repair
91090232 (L203_106024)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdep03032
]
91090232 (L203_106024)
03036 Chromosome and associated proteins [BR:
cdep03036
]
91090232 (L203_106024)
03400 DNA repair and recombination proteins [BR:
cdep03400
]
91090232 (L203_106024)
DNA replication proteins [BR:
cdep03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
91090232 (L203_106024)
DNA Replication Termination Factors
ELG1-RFC complex
91090232 (L203_106024)
Chromosome and associated proteins [BR:
cdep03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
91090232 (L203_106024)
DNA repair and recombination proteins [BR:
cdep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
91090232 (L203_106024)
Check point factors
HRAD17(Rad24)-RFC complex
91090232 (L203_106024)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_14
AAA_assoc_2
AAA_11
DUF815
AAA_30
RCF1-5-like_lid
AAA_22
AAA_16
AAA_5
RuvB_N
AAA_18
AAA_24
ResIII
AAA_19
AAA_28
DEAD
AAA_3
nSTAND3
AAA_7
ATPase_2
bpMoxR
Mg_chelatase
Viral_helicase1
RNA_helicase
AAA_25
Motif
Other DBs
NCBI-GeneID:
91090232
NCBI-ProteinID:
XP_066071481
UniProt:
A0AAJ8M4N4
LinkDB
All DBs
Position
8:join(307459..307625,307669..307733,307788..307844,307889..308045,308095..308168,308218..308377,308424..308505,308565..308694,308746..308878,308995..309091)
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AA seq
373 aa
AA seq
DB search
MTDLMDVDPAVQPQNKSIGSEKPKNAIAALMANAKGKAKDTGSRQTDGEDKEGLPWVEKY
RPVLLDDVVSHKDITSTIEKFIEVGRLPHLLFYGPPGTGKTSTVLALARRLYGPGYKKHI
LELNASDDRGIDVVREQIKNFAMTKVLFSKGFKLVILDEADMMTQAAQSALRRVIEQHTK
NVRFCILCNYVNKITPAIQSRCTRFRFSPLPESEIKVKVDEVVQKEGVNLTDEGRDALLK
LSRGDMRRALNVLQACYAAYETVDEAAVYNCTGNPHPKDIERIVQSMMADEFGTAYSLIT
SLKTEKGLALQDLIAGAYDFLDTVELPKQSRVYLLDHLGSTEHRLSLGGSEKIQLTALLG
AFKVAVELSQKNI
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgactgatctgatggatgttgatccagctgttcagcctcaaaacaagtcgataggatct
gaaaagccgaaaaatgcaatagcagcgctcatggcaaatgcaaaagggaaagcaaaggat
acagggtcaagacagacagatggagaagataaagaaggactaccttgggtggaaaagtat
agaccggtgttgcttgatgatgttgtatcgcataaagatattactagtacaatcgagaag
tttatcgaagtaggacgattaccccatctactcttttatggtcctcctggtaccggtaaa
acatccaccgtccttgcccttgctcgccgtctttacggaccaggctacaagaagcacatt
cttgagctcaatgcgtccgatgatcgaggcatcgatgttgttagggagcaaatcaagaat
tttgccatgaccaaagtgttgttttctaaggggtttaagctcgtaatcttggatgaagcc
gacatgatgactcaagcagctcagtccgcccttcggcgagttattgaacagcatactaaa
aatgtgcgattttgtattctttgcaactatgtcaacaagattacaccagcgatccaaagt
agatgcacaagatttagattctcaccattgcctgaaagcgaaatcaaggtcaaagttgat
gaagttgtgcaaaaagaaggagtgaatcttacagatgaaggacgagacgctctcctcaag
ctctcgcgaggagatatgcgtcgtgctctcaacgttctccaggcttgttacgcggcttat
gagacagtcgacgaggctgctgtgtacaattgtactgggaatccacacccaaaggacata
gaacgcattgtgcagagcatgatggcggacgagttcggtactgcctattccctcatcaca
tccctcaaaactgaaaagggacttgctttgcaagatttaatagcaggtgcctatgacttt
ttagatacagtcgaattaccaaaacagagtagagtgtatctactagaccatttaggaagc
acagagcatcgactgtcgttaggaggttctgaaaagatacagttgactgcattgctggga
gcatttaaggtggccgtcgagttatcgcaaaagaatatttga
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