Cryptococcus depauperatus: 91090360
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Entry
91090360 CDS
T10265
Symbol
L203_106152
Name
(RefSeq) uncharacterized protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
cdep Cryptococcus depauperatus
Pathway
cdep03022
Basal transcription factors
cdep03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cdep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
91090360 (L203_106152)
09124 Replication and repair
03420 Nucleotide excision repair
91090360 (L203_106152)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdep03021
]
91090360 (L203_106152)
03400 DNA repair and recombination proteins [BR:
cdep03400
]
91090360 (L203_106152)
Transcription machinery [BR:
cdep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
91090360 (L203_106152)
DNA repair and recombination proteins [BR:
cdep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
91090360 (L203_106152)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
DUF7066
Tra1_ring
Motif
Other DBs
NCBI-GeneID:
91090360
NCBI-ProteinID:
XP_066071607
UniProt:
A0AAJ8JYN1
LinkDB
All DBs
Position
8:complement(join(600809..600952,601005..601113,601171..601837,601892..602016,602063..602167,602222..602340,602390..602527))
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AA seq
468 aa
AA seq
DB search
MPIDIDDIQVSGNEEEEDDIDQDDLPGSSSRASRRRGKWREGKNKDTGKQAWEEEFKKSW
DIVQEDEKGSLESAVESLLARGRRKRAMMSETPVRRSIIRHMFIIVDLSESMQDKDYRPT
RHEVVLGYLKTYVVEWFDQNPLGQIGVVLMRDRLSEILVPIGGSTGEIVRALSDKRKLEP
SGEPSLQNGLTMAKGGMSHLPSTSSLEILVIFSAISTADPDGPITIHDVLDDLVQSKVHT
SILSLSGEIKVCRQIAERTGGKFGVALDQEHLKDLLWETIPPPATVVAPVTANVRAALSA
GGQNANGAAGGPGAVGNKPTPAGDLMIMGFPIRLPLGGETMCACHGLLKKGGYLCPRCGS
KLCDVPTDCEVCGLMVVSSPHLARSFWFLFPVANYKALQVDDTVGSSTNEICFGCDIEFP
DISTANGQVEDSVSPTGRYRCAKCKNDFCADCDLYIHDTLHTCPGCSQ
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgcctatagatattgatgacatacaggtctcgggaaacgaagaggaagaggatgatatt
gatcaagacgacctgcctggttcatcatcacgggcaagcagacgcagaggtaaatggcga
gagggcaagaataaggatactggcaaacaagcttgggaagaggaatttaagaaatcatgg
gacatagtacaggaagacgaaaaaggttctttagaatcagctgtggaaagtcttctggcc
agaggacgacggaagagagcaatgatgtctgaaactccagtcaggagatctatcatcagg
catatgtttatcattgttgacttatcggaatctatgcaggataaggattatcgtccgacc
agacacgaagtggtattgggatacctcaagacttatgtggttgaatggtttgatcagaat
ccattgggccaaatcggagttgtcttgatgagagaccgtttatctgagattctcgtgcct
ataggaggcagtacaggagaaattgtacgcgctctttcagataaacgcaaacttgaaccc
tctggcgagccatctcttcaaaacggcctcactatggccaaaggtggcatgtcacatctt
ccatctacgtcttccctcgagatcctcgtcatcttctcggcgatatctaccgctgatccc
gacggaccgatcactattcacgatgttcttgatgatttggtacagtccaaggtccacaca
agtatcttgtctctaagcggagaaatcaaggtgtgtaggcagatagcggagaggacagga
ggtaaatttggagtggctttggatcaagagcatctgaaagatttgctttgggagacgatt
ccgccacctgcaacggttgttgcacctgttactgcgaatgtcagagcagccctctctgca
gggggacaaaacgcaaatggcgctgcaggaggaccaggggcagtggggaacaaacctacg
ccagcgggtgacttaatgattatgggctttcctatccgattacccctaggaggagaaaca
atgtgtgcgtgccacggattattaaagaaagggggatatctctgtcctaggtgtgggagt
aagctatgtgatgtacctactgactgtgaagtctgtggattgatggtcgttagcagtcct
cacttggcccgaagtttttggtttctattccctgttgccaattacaaagcgttacaagtg
gatgatacggtgggttcaagtaccaatgaaatctgttttggttgcgatatagaatttccc
gacatatcgacggcgaatggtcaagttgaagacagtgtcagtcctacgggaagatataga
tgcgccaagtgcaagaacgatttttgcgctgactgtgatctctacattcatgacactcta
catacatgtcctggatgttctcaatag
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