Candidatus Chromulinivorax destructor: C0J27_00735
Help
Entry
C0J27_00735 CDS
T08204
Name
(GenBank) ATP-dependent helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
cdes
Candidatus Chromulinivorax destructor
Pathway
cdes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C0J27_00735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdes03019
]
C0J27_00735
Enzymes [BR:
cdes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C0J27_00735
Messenger RNA biogenesis [BR:
cdes03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C0J27_00735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Flavi_DEAD
AAA_30
AAA_19
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AXK60278
UniProt:
A0A345ZAG1
LinkDB
All DBs
Position
158232..159731
Genome browser
AA seq
499 aa
AA seq
DB search
MNQNSSRPTNPRSTQQSRDGRPSFSSNKKRSNDSHSNSYSSQGNSSYSSQGNGSSSQGER
SSSSSRPSYQGSSNGGERSSYGSSNSSQGGRSYGSSQGGRSSYGSSSQGGRSSYGSQGGY
GGGRNRRPSKKNTLDISAFINRVTADTTPAAVFVPKHQFAELNLHADLLKNLETRGFVQP
TPIQDAVIPSITNNNQDLVGLANTGTGKTGAFLIPLINKALTNRDQQTLILAPTRELAVQ
IEKEFYLLSRNLRLTSVVIVGGAPIWPQMQKAKTFNNFVVGTPGRVIDLIKRGALKLENF
KTAVLDEADRMLDMGFITDIKYILSHLPEERQTLFFSATLSSEIKGLISDFLKNPINVSV
KTGDTSKNIHQDVVRMNGRSKIDVLQEMLSQAEFSKVLAFGKTKHGVDKIYESLIEVGIK
AESIHGNKSHGQRQRALQNFKNDRAKILIATDVAARGIDISGITHVINFDTPQSYDDYIH
RIGRTGRGNQKGVALTFID
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaaaattcatctcgacctactaatcctaggtcaacgcaacaatcacgtgatggt
agaccttctttttcttctaacaaaaaaagatctaacgattcacacagcaactcgtatagc
tcacaaggtaattcatcatacagttcacaaggtaatggctcaagctcacaaggcgaaaga
tcatcatcttcatctcgtccatcataccaaggcagcagcaatggcggcgaacgctcttca
tacggatcatcaaattcatctcaaggcggcagatcatacggatcgtctcaaggtggtaga
tcatcttatggatcttcttcacaaggcggcagatcttcttatggttcacaaggtggttac
ggcggcggacgcaatcgtcgaccaagcaaaaaaaatacacttgatatttcagcgtttatt
aacagagtaactgctgacacaacacctgcagcggtttttgttccaaaacaccagtttgct
gagttaaacttacatgcagatcttttaaaaaacttagaaacacgtggatttgttcaacca
actccaattcaagatgctgttattccaagtattacgaataataaccaggatcttgtagga
cttgctaacacaggtacaggtaaaacaggtgctttcttaattcctttaattaacaaagcg
ctgacaaacagagatcaacaaacattaatcttagctccaactcgtgagttagcggttcaa
atcgaaaaagaattttatcttctttctagaaacttacgcttaacttcagttgttatcgtt
ggtggtgctccaatttggccacaaatgcaaaaagctaaaacttttaataactttgttgtt
ggtacacctggacgtgttatcgatcttattaaacgtggtgcattaaaactagaaaacttt
aaaacagctgttctagacgaagcagatagaatgcttgatatgggcttcatcactgacatt
aaatacattttaagtcacttacctgaagaacgtcaaacactattcttctctgcaacgtta
tcatctgaaattaaaggtttgatcagtgatttcttgaaaaatccaattaacgtttctgtt
aaaactggtgatacttcaaaaaacattcatcaagacgttgttagaatgaacggccgtagc
aaaattgatgttttacaagaaatgttgtcacaagcagaattttctaaagttctagctttt
ggtaaaacaaaacacggtgttgataaaatttatgaatcattaattgaagttggcatcaaa
gctgaatcaattcatggtaataaatcacatggtcaacgtcaaagagctttgcaaaacttc
aaaaatgatcgcgcaaagatcttaatcgcaactgacgttgcagctcgaggaatcgatatc
agtggtattactcacgtaattaactttgatactcctcaaagctatgatgattacattcat
agaattggtcgtacaggtagaggcaaccaaaaaggtgtagctcttactttcatcgactag
DBGET
integrated database retrieval system
